Return to main results Retrieve Phyre Job Id

Job DescriptionP77704
Confidence89.23%DateThu Jan 5 12:31:54 GMT 2012
Rank211Aligned Residues130
% Identity14%Templatec3cb3B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of l-talarate dehydratase from polaromonas sp. js6662 complexed with mg and l-glucarate
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 





























..
Query SS confidence 













































































. .
Query Sequence  MEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVE. .
Query Conservation   
 
  

  









 
  



  
 


  

  

 

 


 


 
           
 



  

 ..
Alig confidence 





































...............














.








..
Template Conservation            
    
 


      
   
  

   ...............
    
 



    .   
      
Template Sequence  MVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL. . . . . . . . . . . . . . . GDAVPLMVDANQQWD. RPTAQRMCRIF
Template Known Secondary structure  TT





S
...............
TTS

TT


.
Template Predicted Secondary structure 









...............









.
Template SS confidence 















































































   165....170.........180.........190.........200.. .......210....... ..220........
 
   164.....170.........180.........190.........200.........210.........220... ......230.........240.
Predicted Secondary structure  .




























.

Query SS confidence  .



























































.

















Query Sequence  . RTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLG. IAKINIHTELCQAAMVAV
Query Conservation  . 



 






 

 
   
 

   
  
   
 









        

  
.
 



 
 
  
     
Alig confidence  .







..........























.
















.

















Template Conservation      
  

..........

    
      
     



 .

           
     
    
    



   
Template Sequence  EPFNLVWIE. . . . . . . . . . EPLDAYDHEGHAALALQFDTPIAT. GEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFL
Template Known Secondary structure  GGG

S..........

S
TT

SS
.
TT

ST

S


TS
Template Predicted Secondary structure 


..........










.


















Template SS confidence 















































































   229230....... ..240.........250.........260. ........270.........280.........290.......
 
   242
Predicted Secondary structure 
Query SS confidence 
Query Sequence  K
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  K
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   298
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions