Job Description P77704 Confidence 33.98% Date Thu Jan 5 12:31:54 GMT 2012 Rank 455 Aligned Residues 128 % Identity 20% Template c2y0fD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.
Predicted Secondary structure																																			.	.	.	.	.	.																																				.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.																																				.	.	.	.	.
Query Sequence		E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	.	.	.	.	.	.	R	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	.	.	.	.	.	V
Query Conservation																																			.	.	.	.	.	.																																				.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.												.	.	.	.	.	.	.							.	.										.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.							.	.
Template Sequence		T	V	Y	V	G	R	V	P	I	G	G	A	H	P	I	A	V	Q	S	M	T	N	T	P	T	R	D	V	E	A	T	T	A	Q	V	L	E	L	H	R	A	G	S	E	I	V	R	L	T	V	.	.	.	.	.	.	.	N	D	E	E	A	A	.	.	K	A	V	P	E	I	K	R	R	L	L	A	E	G	V
Template Known Secondary structure						T	T				S	T	T	S										S		T	T															T	T		S							.	.	.	.	.	.	.		S					.	.	T	T											T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.							.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.											.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure							.	.															.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Query SS confidence							.	.															.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Query Sequence		S	V	P	L	V	.	.	L	H	G	A	S	G	I	S	D	A	D	I	K	T	.	.	.	A	I	S	L	G	I	A	K	I	N	I	H	T	E	L	C	Q	A	A	M	V	A	V	K	E	N	Q	D	Q	.	.	.	.	.	.	.	.	.	.	P	F	L	H	L	E	R	E	V	R	.	.	.	.	.	.	.
Query Conservation							.	.															.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Alig confidence							.	.			.	.	.	.									.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		E	V	P	L	V	G	D	F	H	.	.	.	.	F	N	G	H	L	L	L	R	K	Y	P	K	M	A	E	A	L	D	K	F	R	I	N	P	E	H	F	A	E	M	I	R	I	A	M	D	L	G	K	P	V	R	I	G	A	N	W	G	S	L	D	P	A	L	L	T	E	L	M	D	R	N	A	S	R	P	E
Template Known Secondary structure										S	.	.	.	.	S																	S								T	T									T	T	T									G	G	G	S															S	S	S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
											258	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	K	A	V	K	E	R	A	L	E	K	I	K	L	F
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	S	A	H	E	V	V	L	E	A	L	V	E	S	A	V	R	A	Y	E	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions