Job Description P77704 Confidence 84.39% Date Thu Jan 5 12:31:54 GMT 2012 Rank 249 Aligned Residues 110 % Identity 20% Template c2fptA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, mitochondrial; PDBTitle: dual binding mode of a novel series of dhodh inhibitors Resolution 2.40 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.														.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.												.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.												.	.
Query Sequence		D	P	D	Q	A	A	E	F	V	E	R	T	G	C	D	S	L	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	.	.	E	V	V	K	R	V	R	D	A	V	S	.	.	V	P	L	V	L	H	G	A	S	G	I	S	D	A	D	I
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.												.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.												.	.													.
Template Conservation																																																																														.
Template Sequence		D	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T	Q	T	I	R	E	M	Y	A	L	T	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	G	.	Q	D	A
Template Known Secondary structure														T										B	S				T	T				T	T	T	T	S	S	S																						T	T	T		S						S	S			S		.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	A	I	S	L	G	I	A	K	I	N	I	H	T	E	L	C	Q	A	A	M	V	A	V	K	E	N	Q	D	Q	P	F	L	H	L	E	R	E	V	R	K	A	V	K	E	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	K	I	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	G	P	P	V	V	G	K	V	K	R	E	L	E	A	L	L	K	E	Q	G	F	G	G	V	T	D	A	I
Template Known Secondary structure								T		S					S								T																	T	T		S	S					T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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