Job Description P77704 Confidence 80.74% Date Thu Jan 5 12:31:54 GMT 2012 Rank 267 Aligned Residues 153 % Identity 13% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		G	N	T	S	F	E	D	F	S	H	M	M	V	S	M	A	Q	.	.	K	A	T	V	P	V	I	T	H	W	D	H	G	R	S	M	E	I	I	H	N	A	W	T	H	G	M	N	S	L	M	R	D	A	S	A	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E
Query Conservation																			.	.
Alig confidence																			.	.										.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	.	.	.	.	.	.	.	G	R	V	D	I	A	L	F	S	T	I	H	R	V	Q	L	P	S	G	S	F	S	P	K	Q	I	.	.	.	.	.	.	.	.	.	R	A	R	F	P	H	L	H	I	G
Template Known Secondary structure		T	T	S															T	T			G	G	G					.	.	.	.	.	.	.	S							T	T	T								T	T	S							.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.										.	90	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	R	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	S	V	P	L	V	L	H	G	A	S	G	I
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.												.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.												.	.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		R	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	L	E	E	A	V	Q	.	A	E	K	E	D	A	D	Y	V	L	F	.	.	.	.	.	.	.	.	.	.	G	H	V	F	R	G	V	S	L	L	S	D	I	K	Q	R	I	S	I	P	V	I	A	I	G	G	.	.	M
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S							.				T	T		S					.	.	.	.	.	.	.	.	.	.																			S						S	S	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.												.	.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		99	100	.																			.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	A	D	I	K	T	A	I	S	L	G	I	A	K	I	N	I	H	T	E	L	C	Q	A	A	M	V	A	V	K	E	N	Q	D	Q	P	F	L	H	L	E	R	E	V	R	K	A	V	K	E	R
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	D	R	L	R	D	V	K	Q	A	G	A	D	G	I	A	V	M	S	G	I	F	.	.	.	.	.	.	.	.	.	.	S	S	A	E	P	L	E	A	A	R	R	Y	S	R	K	L	K	E	M
Template Known Secondary structure			G	G	G							T	T		S					S					.	.	.	.	.	.	.	.	.	.	T	S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180											.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions