Phyre 2 alignment of P77704 with c1y80A

Job Description P77704
Confidence 68.78% Date Thu Jan 5 12:31:54 GMT 2012

Rank 315 Aligned Residues 65

% Identity 14% Template c1y80A_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica

Resolution 1.70 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	R	T	G	C	D	S	L	A	V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	.	.	V	S	V	P	L	V	L	H	G	A	S	G	I	S	D	A	D	I	K	T	A
Query Conservation																																																		.	.
Alig confidence																										.	.	.	.	.																				.	.
Template Conservation																										.	.	.	.	.
Template Sequence	G	V	D	I	E	P	G	K	F	V	E	A	V	K	K	Y	Q	P	D	I	V	G	M	S	A	.	.	.	.	.	L	L	T	T	T	M	M	N	M	K	S	T	I	D	A	L	I	A	A	G	L	R	D	R	V	K	V	I	V	G	G	A	P	L	S	Q	D	F	A	D	E	I
Template Known Secondary structure		S	S	B															S							.	.	.	.	.		S	G	G	G	T													T	T		G	G	G							S	T	T
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
	123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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