Job Description P77704 Confidence 92.73% Date Thu Jan 5 12:31:54 GMT 2012 Rank 180 Aligned Residues 215 % Identity 16% Template c1nvmG_ PDB info PDB header:lyase/oxidoreductase Chain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase; PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate Resolution 1.70 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.																								.
Query SS confidence																																						.	.	.	.	.	.	.																								.
Query Sequence		W	N	A	E	M	L	M	G	V	I	D	A	A	E	E	A	K	S	P	V	I	I	S	F	G	T	G	F	V	G	N	T	S	F	E	D	.	.	.	.	.	.	.	F	S	H	M	M	V	S	M	A	Q	K	A	T	V	P	V	I	T	H	W	D	H	G	.	R	S	M	E	I	I	H	N	A	W	T	H	G
Query Conservation																																						.	.	.	.	.	.	.																								.
Alig confidence																																						.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		Y	T	L	D	D	V	R	A	I	A	R	A	L	D	K	A	K	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	R	H	T	D	L	E	Y	I	E	A	V	A	G	E	I	S	H	A	Q	I	A	T	L	L	L	P	G	I	G	S	V	H	D	L	K	N	A	Y	Q	A	G
Template Known Secondary structure																	T	T		S					S		T	T	S	T	T			B	T	T	T	B			S	S											T	T		S	S	S								B	T	T	B												T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.			.	170	.
Predicted Secondary structure																																																																					.	.	.						.	.
Query SS confidence																																																																					.	.	.						.	.
Query Sequence		M	N	S	L	M	R	D	A	S	A	F	D	F	E	E	N	I	R	L	T	K	E	A	V	D	F	F	H	P	L	G	I	P	V	E	A	E	L	G	H	V	G	N	E	T	V	Y	E	E	A	L	A	G	Y	H	Y	T	D	P	D	Q	A	A	E	F	V	E	.	.	.	R	T	G	C	D	.	.	S	L	A
Query Conservation																																																																					.	.	.						.	.
Alig confidence																.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.						.	.
Template Conservation																.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	V	V	R	V	A	T	H	C	T	E	A	D	.	.	.	.	V	S	K	Q	H	I	E	Y	A	R	N	L	G	M	D	T	V	G	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	M	M	S	H	M	I	P	A	E	K	L	A	E	Q	G	K	L	M	E	S	Y	G	A	T	C	I	Y	M	A
Template Known Secondary structure											T	T		G	G	.	.	.	.	G	G										T	T								.	.	.	.	.	.	.	.	.	.	.	.	.		T	G	G	G	S																T		S
Template Predicted Secondary structure																.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140														.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.													.	.	230	.	.	.	.	.
Predicted Secondary structure																														.	.											.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.											.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	I	G	N	Q	H	G	V	Y	T	S	E	P	Q	L	N	F	E	V	V	K	R	V	R	D	A	V	.	.	S	V	P	L	V	L	H	G	A	S	.	.	G	I	S	D	A	D	I	K	T	A	I	S	L	G	I	A	K	I	.	.	.	.	.	.	.	.	.	.	.	.	N	I	H	T	E	L	C	Q
Query Conservation																														.	.											.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																	.	.											.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		D	S	G	G	A	M	.	.	.	.	.	.	S	M	N	D	I	R	D	R	M	R	A	F	K	A	V	L	K	P	E	T	Q	V	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	V	A	V	E	E	G	C	D	R	V	D	A	S	L	A	G	M	G	A	G	A	G	N	A	P	L	E	V	F	I
Template Known Secondary structure			T	T	S			.	.	.	.	.	.																S		T	T	S							B		T	T	S												T	T							B	G	G	G		S	S	T	T		B		B
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	V	A	V	K	E	N	Q	D	Q	P	F	L	H	L	E	R	E	V	R	K	A	V	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	A	E	R	L	G	W	N	H	G	T	D	L	Y	T	L	M	D	A	A	D	D	I	V	R	P
Template Known Secondary structure							T	T		B			S												T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions