|   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
. | . | . | . | . | . | 130 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | E | I | I | H | N | A | W | T | H | G | M | N | S | L | M | R | D | A | S | A | . |
. |
. |
. |
. |
. |
. |
. |
F | D | F | E | E | N | I | R | L | T | K | E | A | V | D | F | F | . |
. |
. |
H | P | L | G | I | P | V | E | A | . |
. |
. |
. |
. |
. |
E | L | G | H | V | G | N | E | T | V | Y | E | E | A | L | A |
Query Conservation |   |
  |
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . |
|   |   |
|
|
|
|   |   |
|   |
|
|
|   |   |
| . | . | . |
|   |   |
|
|   |
|
|   | . | . | . | . | . | . |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
Y | H | N | L | K | S | L | T | K | K | R | Y | G | A | S | A | G | N | V | G | D | E | G | G | V | A | P | N | I | Q | T | A | E | E | A | L | D | L | I | V | D | A | I | K | A | A | G | H | D | G | K | V | K | I | G | L | D | C | A | S | S | E | F | F | K | D | G | K | Y | D | L | D | F | K | N | P | N | S | D | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  | S | B |
| T | T | S |
| B |
|
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T |
|  |  |  |  |  |
|
| G | G | G | G |  |  | T | T |  |  |
| T | T | T | T |
| T | T |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . |
  |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Y | H | Y | T | D | P | D | Q | A | A | E | F | V | E | R | T | . |
. |
. |
. |
G | C | D | S | L | A | V | A | I | G | N | Q | H | G | V | Y | T | S | E | P | Q | L | N | F | E | V | V | K | R | V | R | D | A | V | S | V | P | L | V | L | H | G | A | S | G | I | S | D | A | D | I | K | T | A | I | S | L | G | I |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |
| . | . | . | . |
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
| . |   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
S | K | W | L | T | . |
G | P | Q | L | A | D | L | Y | H | S | L | M | K | R | Y | P | I | V | S | I | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | P | F | A | E | D | D | W | E | A | W | S | H | F | F | K | T | A | G | I | Q | I | V | A | D | D | L | T | V | T | N | P | K | R | I | A | T | A | I | E | K | K | A |
Template Known Secondary structure |   |
T | T |
| B |
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
| S |
| T | T |
|  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  | S | T | T | T | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1270 | . | . | . | . | |
. | . | . | . | . | 1280 | . | . | . | . | . | . | . | . | . | 1290 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | 1300 | . | . | . | . | . | . | . | . | . | 1310 | . | . | . | . | . | . | . | . | . | 1320 | . | . | . | . | . | . | . | . | . | 1330 | . | . | . | . | . | . | . | . |
  |
  |   |
225 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
A |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
A |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
1339 |
  |