Job Description P38097 Confidence 69.46% Date Thu Jan 5 11:57:56 GMT 2012 Rank 220 Aligned Residues 129 % Identity 17% Template d2tpsa_ SCOP info TIM beta/alpha-barrel Thiamin phosphate synthase Thiamin phosphate synthase Resolution 1.25

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		949	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.									.	.	.	.	.	.	990	.	.	.	.	.	.		.	.	.	1000	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.														.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.														.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	V	A	G	L	S	S	A	T	L	V	N	D	L	L	E	Q	L	E	N	S	P	L	P	P	R	L	L	H	L	I	I	P	A	.	.	.	.	.	.	.	.	E	A	I	L	D	H	A	E	S	V	Q	K	L	.	R	L	A	G	C	R	I	V	L	S	Q	V	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.	.	.	.														.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.				.	.	.	.							.	.	.	.	.	.	.	.														.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.				.	.	.	.
Template Sequence		I	M	G	S	N	N	T	K	A	D	P	V	T	V	V	Q	K	A	L	K	G	.	G	A	T	.	.	.	.	L	Y	Q	F	R	E	K	G	G	D	A	L	T	G	E	A	R	I	K	F	A	E	K	A	Q	A	A	C	R	E	A	G	V	P	F	I	V	N	D	D	V	E	L	A	L	N	L	K	A	D	G
Template Known Secondary structure					G	G	G		S	S													.	T		S	.	.	.	.								S	T	T																						T							S									T		S
Template Predicted Secondary structure																							.				.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
																											1009	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.		.	.	.	.	1060	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	D	L	Q	I	F	N	S	L	K	A	N	M	A	D	Y	L	L	L	D	G	E	L	C	A	N	V	Q	G	N	L	M	D	E	M	L	I	T	I	I	Q	G	H	A	Q	R	.	L	G	M	K	T	I	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template Conservation
Template Sequence		I	H	I	G	Q	E	D	A	N	A	K	E	V	R	A	A	I	G	D	M	I	L	G	V	S	A	H	T	M	S	E	V	K	Q	A	E	E	D	G	A	D	Y	V	G	L	G	P	I	Y	P	T	E	T	K	K	D	T	R	A	V	Q	G	V	S	L	I	E	A	V	R	R	Q	G	I	S	I	P	I	V	G
Template Known Secondary structure						T	T	S	S										T	T	S								S											T		S							S	S				S	S	S	S						T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		1063	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	V	V	L	P	L	V	M	D	T	L	S	G	I	G	V	D	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	G	I	T	I	D	N	A	A	P	V	I	Q	A	G	A	D	G	V
Template Known Secondary structure			S	S			T	T	T	S						T	T		S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions