Return to main results Retrieve Phyre Job Id

Job DescriptionP38097
Confidence42.41%DateThu Jan 5 11:57:56 GMT 2012
Rank316Aligned Residues85
% Identity18%Templated2hmva1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Potassium channel NAD-binding domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   988.990.........1000.........1010.........1020.........1030.........1040.........1050.........1060.......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  DHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVL
Query Conservation       
  
   
    




 
 

   
     
 



                   
   
       





 
Alig confidence 



















....
















...




















...











Template Conservation                    

....      
    
  
  ...

     
             ...     


    
Template Sequence  INEEKVNAYASYATHAVIAN. . . . ATEENELLSLGIRNFEY. . . VIVAIGANIQASTLTTLLLKE. . . LDIPNIWVKAQN
Template Known Secondary structure  S
TTTT
S

....TT
TTTGGG
S...


S
...TT
S

S
Template Predicted Secondary structure 







....





...



...






Template SS confidence 















































































   37..40.........50...... ...60.........70... ......80.........90.... .....100......
 
   1068.1070.........1080..
Predicted Secondary structure 


Query SS confidence 














Query Sequence  PLVMDTLSGIGVDLI
Query Conservation        
   
    
Alig confidence 














Template Conservation        
   
 
 
Template Sequence  YYHHKVLEKIGADRI
Template Known Secondary structure  T
S
Template Predicted Secondary structure 



Template SS confidence 














   107..110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions