 |
Job Description | P38097 | Confidence | 92.69% | Date | Thu Jan 5 11:57:56 GMT 2012 |
Rank | 112 | Aligned Residues | 115 |
% Identity | 15% | Template | d2ayxa1 |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | UNK |
|
 |
  |   |
973 | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | P | R | L | L | H | L | I | I | P | A | E | A | I | L | D | H | A | E | S | V | Q | K | L | R | L | A | G | C | R | I | V | L | S | Q | V | G | R | D | L | Q | I | F | N | S | L | K | A | N | M | A | D | Y | L | L | L | D | G | E | L | C | A | N | V | Q | G | N | L | M | D | E | M | L | I | T | I | I | Q | G | H |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   | . | . |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   | . | . | . | . | . |
|
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |
Template Sequence |   |
D | N | D | D | M | M | I | L | V | V | D | D | H | P | I | N | R | R | L | L | A | D | Q | L | G | S | L | G | Y | Q | C | K | T | . |
. |
A | N | D | G | V | D | A | L | N | V | L | S | K | N | H | I | D | I | V | L | S | D | V | N | . |
. |
. |
. |
. |
M | P | N | M | D | G | Y | R | L | T | Q | R | I | R | Q | L |
Template Known Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  | . | . |  |
|
| S |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  |  | S | . | . | . | . | . | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
821 | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | |
|
. | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . |
  |
  |   |
1053 | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | R | L | G | M | K | T | I | A | G | P | V | V | L | P | L | V | M | D | T | L | S | G | I | G | V | D | L | I | Y | G | E | V | I | A | D | A | Q | P | L | D | L | L | V | N | S |
Query Conservation |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
Template Sequence |   |
G | L | . |
T | L | P | V | I | G | V | T | A | N | A | L | A | E | E | K | Q | R | C | L | E | S | G | M | D | . |
. |
. |
. |
S | C | L | S | K | P | V | T | L | D | V | I | K | Q | T |
Template Known Secondary structure |   |
 |
| . |
| S |
|  |  |  |  |  | S | S | T | T | S |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
894 | . | |
. | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | |
|
|
|
. | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|