Return to main results Retrieve Phyre Job Id

Job DescriptionP38097
Confidence56.91%DateThu Jan 5 11:57:56 GMT 2012
Rank256Aligned Residues147
% Identity9%Templated1vrda1
SCOP infoTIM beta/alpha-barrel Inosine monophosphate dehydrogenase (IMPDH) Inosine monophosphate dehydrogenase (IMPDH)
Resolution2.18

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   929930.........940.........950.........960.........970.........980.........990.........1000 ......
Predicted Secondary structure 

















..
Query SS confidence 







































































. .





Query Sequence  EFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAG. . CRIVLS
Query Conservation                    



   
            
         
  

 
         
  
   
..    

Alig confidence 




















....















...



























..





Template Conservation                       ....                ...
   
 
             
  
       




Template Sequence  DEQARQVSIVKKTRLLVGAAV. . . . GTSPETMERVEKLVKA. . . GVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG
Template Known Secondary structure  T




....
SSTTT...T
S

S

SS
TTS
Template Predicted Secondary structure 


....


...













Template SS confidence 















































































   73......80.........90... ......100......... 110.........120.........130.........140.....
 
   1007..1010.........1020.........1030.........1040. ........1050.........1060.... .....1070.........
Predicted Secondary structure 














......



.




Query SS confidence 


































. . . . . .






















.














Query Sequence  QVGRDLQIFNSLKANMADYLLLDGELCANVQGNLM. . . . . . DEMLITIIQGHAQRLGMKTIAGP. VVLPLVMDTLSGIGV
Query Conservation 


 
 

   
     
 



            ......       
   
       



.

       
   
 
Alig confidence 



.





























......






















.














Template Conservation   
 
.   
     



 
 
   

           
 
    
  
        
 


 


  
 

 






Template Sequence  NVAT. PEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGA
Template Known Secondary structure 
S.TT
S
SS
STT





TTT

S


STT
Template Predicted Secondary structure 



.
































Template SS confidence 















































































   273... ...280.........290.........300.........310.........320.........330.........340.........350.
 
   1080...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  DLIY
Query Conservation     
Alig confidence 



Template Conservation 
 
 
Template Sequence  ESVM
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 



   352...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions