 |
Job Description | P38097 | Confidence | 83.79% | Date | Thu Jan 5 11:57:56 GMT 2012 |
Rank | 171 | Aligned Residues | 68 |
% Identity | 18% | Template | d1ua7a2 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 2.21 |
|
 |
  |   |
990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | S | V | Q | K | L | R | L | A | G | C | R | I | V | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | Q | V | G | R | D | L | Q | I | F | N | S | L | K | A | N | M | A | D | Y | L | L | L | D | G | E | L | C | A | N | V | Q | G | N | L | M | D | E | M | L | I | T | I | I | Q | G | H | A | Q | R | L | G | M | K | T |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
| . | . | . | . | . | . | . | . | . |
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|   |   |
|
|
|   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|
|   |   |
|
|   |   |   | . | . | . | . | . | . | . | . |
|
|   |   |
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|
Template Sequence |   |
K | H | N | M | K | D | I | H | D | A | G | Y | T | A | I | Q | T | S | P | I | N | Q | V | K | E | G | N | Q | G | D | K | S | M | S | N | W | Y | W | L | Y | Q | P | T | S | Y | Q | I | G | N | R | Y | L | . |
. |
. |
. |
. |
. |
. |
. |
G | T | E | Q | E | F | K | E | M | C | A | A | A | E | E | Y | G | I | K | V |
Template Known Secondary structure |   |
 |  | T |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|  |  |  |
|
| T | G | G | G |
|
| B | G | G | G | G | G | G | G | G |
|  |  |  |  |  |  |  |  | T | T | T | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
1061 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
I | A | G | P | V |
Query Conservation |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
Template Sequence |   |
I | V | D | A | V |
Template Known Secondary structure |   |
 |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
95 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|