Job Description P38097 Confidence 99.63% Date Thu Jan 5 11:57:56 GMT 2012 Rank 39 Aligned Residues 109 % Identity 15% Template d1p97a_ SCOP info Profilin-like PYP-like sensor domain (PAS domain) Hypoxia-inducible factor Hif2a, C-terminal domain Resolution UNK

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	A	I	G	M	A	L	V	G	T	E	G	Q	W	L	Q	T	N	K	A	L	C	Q	F	L	G	Y	S	Q	E	E	L	R	G	L	T	F	Q	Q	L	T	W	P	E	D	L	N	K	D	L	Q	Q	V	E	K	L	I	S	G	E	I	N	T	Y	S	M	E	K	R	Y	Y	N	R	N	G	D	V	V	W
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		D	S	K	T	F	L	S	R	H	S	M	D	M	K	F	T	Y	C	D	D	R	I	T	E	L	I	G	Y	H	P	E	E	L	L	G	R	S	A	Y	E	F	Y	H	A	L	D	S	E	N	M	T	K	S	H	Q	N	L	C	T	K	G	.	Q	V	V	S	G	Q	Y	R	M	L	A	K	H	G	G	Y	V	W
Template Known Secondary structure												T	T	T	S		S				T	T					T	S	S						T	T	S						S		S	S	S												T	T	T	S	.												T	T	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		A	L	L	A	V	S	L	V	R	H	.	T	D	G	T	P	L	Y	F	I	A	Q	I	E	D	I	N	E	L	K	R
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		L	E	T	Q	G	T	V	I	Y	N	P	R	N	L	Q	P	Q	C	I	M	C	V	N	Y	V	L	S	E	I	E	K
Template Known Secondary structure												T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions