Job Description P38097 Confidence 99.32% Date Thu Jan 5 11:57:56 GMT 2012 Rank 69 Aligned Residues 99 % Identity 13% Template d1oj5a_ SCOP info Profilin-like PYP-like sensor domain (PAS domain) PAS domain of steroid receptor coactivator 1A, NCo-A1 Resolution 2.2

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																		.																													.
Query SS confidence																		.																													.
Query Sequence		M	A	L	V	G	T	E	G	Q	W	L	Q	T	N	K	A	.	L	C	Q	F	L	G	Y	S	Q	E	E	L	R	G	L	T	F	Q	Q	L	T	W	P	E	D	L	N	K	.	D	L	Q	Q	V	E	K	L	I	S	G	E	I	N	T	Y	S	M	E	K	R	Y	Y	N	R	N	G	D	V	V	W	A	L	L
Query Conservation																		.																													.
Alig confidence																		.																													.
Template Conservation
Template Sequence		M	T	K	Q	D	T	T	G	K	I	I	S	I	D	T	S	S	L	R	A	A	G	R	T	G	W	E	D	L	V	R	K	C	I	Y	A	F	F	Q	P	Q	G	R	E	P	S	Y	A	R	Q	L	F	Q	E	V	M	T	R	G	T	A	S	S	P	S	Y	R	F	I	L	N	D	G	T	M	L	S	A	H	T
Template Known Secondary structure							T	T													T	T			S														T	S		B	T	T	B															S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	S	L	V	R	H	T	D	G	T	P	L	Y	F	I	A	Q	I	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	C	K	L	C	Y	P	M	Q	P	F	I	M	G	I	H	I	I	D	R	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions