Return to main results Retrieve Phyre Job Id

Job DescriptionP38097
Confidence87.12%DateThu Jan 5 11:57:56 GMT 2012
Rank157Aligned Residues68
% Identity15%Templated1gjwa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   990.........1000..... ....1010.........1020.........1030.........1040.........1050......
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Query Sequence  AESVQKLRLAGCRIVL. . . . . . . . . . . . . SQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRL
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Template Sequence  MLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYS. . . . . . . . VKNPMELDERYHDPLLEPFKVDEEFKAFVEACHIL
Template Known Secondary structure  TT






SS
SSSS

TTS........
GGGS
GGGTTS
T
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   123......130.........140.........150......... 160.........170.........180.........190....
 
   1057..1060.....
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Query Sequence  GMKTIAGPV
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Template Sequence  GIRVILDFI
Template Known Secondary structure  T

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   195....200...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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