Return to main results Retrieve Phyre Job Id

Job DescriptionP38097
Confidence50.64%DateThu Jan 5 11:57:56 GMT 2012
Rank285Aligned Residues50
% Identity14%Templated1bf2a3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1015....1020........ .1030.........1040.........1050.........1060
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Query Sequence  FNSLKANMADYLLL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGELCANVQGNLMDEMLITIIQGHAQRLGMKT
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Template Sequence  ASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYN. KAAGGPTAEFQAMVQAFHNAGIKV
Template Known Secondary structure  T

S

B
BS
TTTTSSTT

TT


S


BS
SS
B
GGG
S
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STTTT
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   211........220.........230.........240.........250.........260..... ....270.........280.........
 
   1061....
Predicted Secondary structure 
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Query Sequence  IAGPV
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Template Sequence  YMDVV
Template Known Secondary structure 
Template Predicted Secondary structure 
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   290....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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