Job Description P38097 Confidence 46.14% Date Thu Jan 5 11:57:56 GMT 2012 Rank 300 Aligned Residues 134 % Identity 14% Template c3sqsA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing protein from dinoroseobacter shibae dfl 12 Resolution 1.90 Å

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		915	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	L	S	H	A	L	D	R	R	V	F	H	E	F	F	Q	Q	A	A	K	A	V	A	S	K	G	I	S	I	S	L	P	L	S	V	A	G	L	S	S	A	T	L	V	N	D	L	L	E	Q	L	E	N	S	P	L	P	P	R	L	L	H	L	I	I	P	A	E	A	I	L	D	H	A	E	S	V	Q
Query Conservation
Alig confidence																																																													.	.	.	.				.	.
Template Conservation																																																													.	.	.	.				.	.
Template Sequence		R	F	G	Y	G	P	K	D	G	P	A	G	M	R	E	N	L	K	R	V	E	A	L	R	E	V	L	G	Y	D	V	D	L	M	L	E	C	Y	M	G	W	N	L	D	Y	T	K	R	M	L	P	K	L	E	R	F	E	P	R	.	.	.	.	W	L	E	.	.	E	P	V	I	A	D	D	V	A	G	Y	A
Template Known Secondary structure							G	G	G																					S	S	S							T	T		S													G	G	G			S	.	.	.	.				.	.			S		T	T
Template Predicted Secondary structure																																																													.	.	.	.				.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260					.	.	.			.	.	.	.	.	.	270	.	.	.	.	.
		995	.	.	.	.		1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.		.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.
Predicted Secondary structure							.																								.
Query SS confidence							.																								.
Query Sequence		K	L	R	L	A	.	G	C	R	I	V	L	S	Q	V	G	R	D	L	Q	I	F	N	S	L	K	A	N	M	.	A	D	Y	L	L	L	D	G	E	L	C	A	N	V	Q	G	N	L	M	D	E	M	L	I	T	I	I	Q	G	H	A	Q	R	L	G	M	K	T	I
Query Conservation							.																								.
Alig confidence							.																								.																	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		E	L	N	A	M	G	I	V	P	I	S	G	G	E	H	E	F	S	V	M	G	C	A	E	L	I	N	R	K	A	V	S	V	L	Q	Y	D	T	N	R	V	G	G	I	T	A	.	.	.	.	.	.	.	A	Q	K	I	N	A	I	A	E	A	A	Q	I	I	V	I
Template Known Secondary structure						T		S	S						T	T			S										T	T			S										T					.	.	.	.	.	.	.												T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.								.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions