Job Description P38097 Confidence 40.59% Date Thu Jan 5 11:57:56 GMT 2012 Rank 324 Aligned Residues 118 % Identity 10% Template c3qldB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: structure of probable mandelate racemase (aalaa1draft_2112) from2 alicyclobacillus acidocaldarius Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		981	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.		.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.		.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																									.
Query SS confidence																				.																									.
Query Sequence		I	P	A	E	A	I	L	D	H	A	E	S	V	Q	K	L	R	L	.	A	G	C	R	I	V	L	S	Q	V	G	R	D	L	Q	I	F	N	S	L	K	A	N	M	.	A	D	Y	L	L	L	D	G	E	L	C	A	N	V	Q	G	N	L	M	D	E	M	L	I	T	I	I	Q	G	H	A	Q	R	L	G	M
Query Conservation																				.																									.
Alig confidence																				.																									.																	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		I	E	Q	P	L	P	E	D	D	W	F	D	L	A	K	L	Q	A	S	L	R	T	P	V	C	L	D	E	S	V	R	S	V	R	E	L	K	L	T	A	R	L	G	A	A	R	V	L	N	V	K	P	G	R	L	G	G	F	G	A	.	.	.	.	.	.	.	T	L	R	A	L	D	V	A	G	E	A	G	X
Template Known Secondary structure						S		T	T											T		S	S					S	T	T			S											T			S										T	S				.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.								.	280	.	.	.	.	.	.	.	.	.	290	.
		1059	1060	.	.	.	.		.	.	.	.	.	1070	.	.	.	.	.	.	.					.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.
Predicted Secondary structure								.														.	.	.	.
Query SS confidence								.														.	.	.	.
Query Sequence		K	T	I	A	G	P	.	V	V	L	P	L	V	M	D	T	L	S	G	I	.	.	.	.	G	V	D	L	I	Y	G	E	V	I	A	D	A	Q	P	L	D	L	L	V	N	S	S	Y	F	A	I	N
Query Conservation								.														.	.	.	.
Alig confidence								.														.	.	.	.
Template Conservation
Template Sequence		A	A	W	V	G	G	X	Y	E	T	G	V	G	R	V	H	G	L	I	A	A	A	L	P	L	X	R	Y	A	T	D	L	G	P	S	D	R	Y	F	E	Q	D	V	L	K	E	P	I	A	F	V	E
Template Known Secondary structure																						T	T	S	T	T			S		B	S				G	G	G	T		S	S		S	B	S	S					S	B
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions