Job Description P38097 Confidence 100.00% Date Thu Jan 5 11:57:56 GMT 2012 Rank 1 Aligned Residues 411 % Identity 20% Template c3pjwA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23 Resolution 3.10 Å

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		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	S	R	K	M	L	R	Q	L	S	Y	S	A	S	H	D	A	L	T	H	L	A	N	R	A	S	F	E	K	Q	L	R	I	L	L	Q	T	V	N	S	T	H	Q	R	H	A	L	V	F	I	D	L	D	R	F	K	A	V	N	D	S	A	G	H	A	A	G	D	A	L	L	R	E	L	A	S	L	M
Query Conservation
Alig confidence																																												.
Template Conservation																																												.
Template Sequence		F	Q	E	Q	A	E	R	S	E	K	L	R	T	E	S	Y	Q	D	N	L	T	G	L	A	N	R	R	Y	F	E	M	Q	L	N	A	R	V	S	N	P	E	Q	.	A	S	S	G	Y	L	L	L	L	R	V	K	D	L	A	G	L	N	Q	R	L	G	G	Q	R	T	D	E	L	L	K	A	V	G	E	Q	L
Template Known Secondary structure						T	T											B		T	T	T	S	S														T	T		T	T	T	.												S
Template Predicted Secondary structure																																												.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		748	.	750	.					.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		L	S	M	L	.	.	.	.	R	S	S	D	V	L	A	R	L	G	G	D	E	F	G	L	L	L	P	D	C	N	V	E	S	A	R	F	I	A	T	R	I	I	S	A	V	N	D	Y	H	F	I	W	E	G	R	V	H	R	V	G	A	S	A	G	I	T	L	I	D	D	N	N	H	Q	A	A	E	V	M	S
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																																								.																								.
Template Conservation																																																	.																								.
Template Sequence		S	R	E	C	A	K	Y	P	E	T	Q	N	L	V	T	R	I	R	G	G	E	F	A	V	L	A	P	G	M	T	R	E	E	A	L	Q	L	A	Q	S	L	D	S	A	L	S	S	.	L	Y	A	T	G	A	T	D	V	A	A	V	A	S	I	G	L	A	P	F	A	H	G	.	D	S	P	Q	A	V	L	S
Template Known Secondary structure						S	S		S	T	T	T	T							T	T								T																		T		.					T	S		S		T	T											T	T	.
Template Predicted Secondary structure																																																	.																								.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.
		824	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	D	I	A	C	Y	A	S	K	N	G	G	R	G	R	V	T	V	Y	E	P	Q	Q	A	A	A	H	S	E	R	A	A	M	S	L	D	E	Q	W	R	M	I	K	E	N	Q	L	M	M	L	A	H	G	V	A	S	P	R	I	P	E	A	R	N	L	W	L	I	S	L	K	L	W	S	C	E	G	E	I
Query Conservation
Alig confidence																													.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		L	G	D	Q	A	L	A	Q	A	E	G	Q	G	E	Q	N	W	A	C	L	D	G	D	D	H	H	A	.	.	.	.	.	.	.	W	H	R	L	L	D	Q	A	L	N	Q	R	R	F	E	L	F	F	Q	P	V	V	A	A	Q	D	T	Q	L	V	L	H	Y	K	V	L	S	R	L	L	D	E	Q	G	Q	T
Template Known Secondary structure												S		S	S		S								S				.	.	.	.	.	.	.											T	T												S	S		T	T														T	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.								.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		904	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	E	Q	T	F	R	R	S	F	S	D	P	A	L	S	H	A	L	D	R	R	V	F	H	E	F	F	Q	Q	A	A	K	A	V	A	S	K	G	I	S	I	S	L	P	L	S	V	A	G	L	S	S	A	T	L	V	N	D	L	L	E	Q	L	E	N	S	P	L	P	P	R	L	L	H	L	I	I	P	A
Query Conservation
Alig confidence																																	.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		I	P	A	G	R	F	L	P	W	L	E	R	F	G	W	T	A	R	L	D	R	L	M	L	E	R	V	L	E	Q	M	.	.	.	.	A	G	H	E	E	S	L	A	L	N	L	S	S	A	T	L	A	D	P	Q	A	L	N	K	V	F	E	I	L	R	A	H	S	N	L	G	A	R	L	T	L	E	I	G	E
Template Known Secondary structure													T	T	T																	G	.	.	.	.	G	G																S	S													T	G	G	G	T	T	T							G
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.					490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
		984	.	.	.	.	.				990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		E	A	I	L	D	H	.	.	.	A	E	S	V	Q	K	L	R	L	A	G	C	R	I	V	L	S	Q	V	G	R	D	L	Q	I	F	N	S	L	K	A	N	M	A	D	Y	L	L	L	D	G	E	L	C	A	N	V	Q	G	N	L	M	D	E	M	L	I	T	I	I	Q	G	H	A	Q	R	L	G	M	K	T
Query Conservation								.	.	.
Alig confidence								.	.	.
Template Conservation
Template Sequence		E	Q	L	P	E	Q	A	V	L	E	Q	L	T	R	R	L	R	E	L	G	F	S	L	S	L	Q	R	F	G	G	R	F	S	M	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	S	Y	I	R	A	I	D	Q	E	S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	L	P	L
Template Known Secondary structure		G	G																	T	T										S		G	G	G	T	S	S							S						T	T	T	T	T	T	T	T	T																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
		1061	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	G	P	V	V	L	P	L	V	M	D	T	L	S	G	I	G	V	D	L	I	Y	G	E	V	I	A	D	A	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	E	R	V	E	T	E	G	E	L	S	V	I	R	E	M	G	L	Y	G	V	Q	G	Q	L	F	G	E	P	K	P
Template Known Secondary structure								S									T	T	T		S				S	G	G	G				B
Template Predicted Secondary structure
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.