Job Description P38097 Confidence 99.70% Date Thu Jan 5 11:57:56 GMT 2012 Rank 30 Aligned Residues 183 % Identity 15% Template c3p7nB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of light activated transcription factor el222 from2 erythrobacter litoralis Resolution 2.10 Å

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		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.				.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		E	R	L	H	I	T	L	D	S	I	G	E	A	V	V	C	I	D	M	A	.	.	.	M	K	I	T	F	M	N	P	V	A	E	K	M	S	G	W	T	Q	E	E	A	L	G	V	P	L	L	T	V	L	H	I	T	F	G	D	N	G	P	L	M	E	N	I	Y	S	A	D	T	S	R	S	A	I	E	Q	D
Query Conservation																						.	.	.
Alig confidence																						.	.	.																														.	.
Template Conservation																																																						.	.
Template Sequence		Q	W	V	L	D	L	I	E	A	S	P	I	A	S	V	V	S	D	P	R	L	A	D	N	P	L	I	A	I	N	Q	A	F	T	D	L	T	G	Y	S	E	E	E	C	V	G	R	N	C	R	F	L	.	.	A	G	S	G	T	E	P	W	L	T	D	K	I	R	Q	G	V	R	E	H	K	P	V	L	V	E
Template Known Secondary structure		S								T		S	S							T	T	S	T	T																						T	T	S		G	G	G	G	.	.	B		T	T	S														T	T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.				.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		V	V	L	H	C	R	S	G	G	S	Y	D	V	H	Y	S	I	T	P	L	S	T	L	D	G	S	N	I	G	S	V	L	V	I	Q	D	V	T	E	S	R	K	M	.	.	.	L	R	Q	L	S	Y	S	A	S	H	D	A	L	T	H	L	A	N	R	A	S	F	E	K	Q	L	R	I	L	L	Q	T	V	N
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.
Template Conservation
Template Sequence		I	L	N	Y	K	K	D	G	T	P	F	R	N	A	V	L	V	A	P	I	Y	D	D	D	D	E	L	L	Y	F	L	G	S	Q	V	E	V	G	M	A	R	R	E	R	A	A	E	M	L	K	T	L	S	P	R	Q	L	E	V	T	T	L	V	A	S	G	L	R	N	K	E	V	A	A	R	L	G	L	S	E
Template Known Secondary structure							T	T	S															T	T	T	T																								T	T	S													T	T											T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		709	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	H	Q	R	H	A	L	V	F	I	D	L	D	R	F	K	A	V	N	D	S	A	G	H	A	A	G	D	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	V	K	M	H	R	G	L	V	M	E	K	L	N	L	K	T	S	A	D	L	V	R	I	A	V	E	A	G	I
Template Known Secondary structure															T	T			S											T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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