Job Description P38097 Confidence 99.57% Date Thu Jan 5 11:57:56 GMT 2012
Rank 46 Aligned Residues 110
% Identity 16% Template c3mfxA_
PDB info
PDB header: transcriptionChain: A: PDB Molecule: sensory box/ggdef family protein;
PDBTitle: crystal structure of the sensory box domain of the sensory-2 box/ggdef protein so_1695 from shewanella oneidensis,3 northeast structural genomics consortium target sor288b
Resolution 2.40 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
298 . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350 . . . . . . . . . 360 . . . . . . . . . 370 . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
S E S E T H F R N A M E Y S A I G M A L V G T E G Q W L Q T N K A L C Q F L G Y S Q E E L R G L T F Q Q L T W P E D L N K D L Q Q V E K L I S G E I N T Y S M E
Query Conservation  
                                                                                                         
Alig confidence  
. . . .
Template Conservation  
                                                                                          . . . .                            
Template Sequence  
H S S L E T I E L F I Q H L T E A X I L V N A N G F I R S C N Q R S A E L L D C P Q V S L K G Q D W R N F L T E H H Q A R .
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Y D N L L S Q P V Q H P A Q E
Template Known Secondary structure  
T T S S T T S B T T S T T S B G G G G B T T G G . . . . G G T T S
Template Predicted Secondary structure  
. . . .
Template SS confidence  
   
19 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . .
80 . . . . . . . . . 90 . . . .
 
   
378 . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
K R Y Y N R N G D V V W A L L A V S L V R H T D G T P L Y F I A Q I E D I
Query Conservation  
                                                   
Alig confidence  
. . .
Template Conservation  
                            . . .                      
Template Sequence  
T T L I C A S G K A K D V E L S I S Y I .
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P G H E P X F V X V X H D L
Template Known Secondary structure  
T T S . . . S S S
Template Predicted Secondary structure  
. . .
Template SS confidence  
   
105 . . . . 110 . . . . . . . . . 120 . . . .
. . . . . 130 . . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]