Return to main results Retrieve Phyre Job Id

Job DescriptionP38097
Confidence93.14%DateThu Jan 5 11:57:56 GMT 2012
Rank106Aligned Residues117
% Identity11%Templatec3lteH_
PDB info PDB header:transcriptionChain: H: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator (signal receiver domain) from2 bermanella marisrubri
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   978.980.........990.........1000.........1010.........1020.........1030.........1040.........1050.......
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  HLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLG
Query Conservation    

 
         
  
   
    




 
 

   
     
 



                   
   
    
Alig confidence 



























..























.....




















Template Conservation 






       
   
   
  
  ..
     

        
 

 
  .....     
      

       
Template Sequence  RILVVDDDQAMAAAIERVLKRDHWQVEI. . AHNGFDAGIKLSTFEPAIMTLDLS. . . . . MPKLDGLDVIRSLRQNKVANQ
Template Known Secondary structure 
S
TT
..SST

SS
.....
SS

TT
SS
Template Predicted Secondary structure 





..













.....











Template SS confidence 















































































   6970.........80.........90...... ...100.........110.........120 .........130.........140.
 
   1058.1060.........1070.........1080.........1090.........1100.....
Predicted Secondary structure 




















Query SS confidence 















































Query Sequence  MKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN
Query Conservation     





       
   
    

     
               
Alig confidence 






















....




















Template Conservation    
  

             
  ....  
 

     
   
   
 
Template Sequence  PKILVVSGLDKAKLQQAVTEGAD. . . . DYLEKPFDNDALLDRIHDLVN
Template Known Secondary structure 

S
TT
S....SS

T
Template Predicted Secondary structure 










....




Template SS confidence 















































   142.......150.........160.... .....170.........180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions