Job Description P38097 Confidence 100.00% Date Thu Jan 5 11:57:56 GMT 2012 Rank 11 Aligned Residues 219 % Identity 12% Template c3kzpA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative diguanylate cyclase/phosphodiesterase; PDBTitle: crystal structure of putative diguanylate cyclase/phosphodiesterase2 from listaria monocytigenes Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	M	M	L	A	H	G	V	A	S	P	R	I	P	E	A	R	N	L	W	L	I	S	L	K	L	W	S	C	E	G	E	I	I	D	E	Q	T	F	R	R	S	F	S	D	P	A	L	S	H	A	L	D	R	R	V	F	H	E	F	F	Q	Q	A	A	K	A	V	A	S	K	G	I	S	I	S	L	P	L
Query Conservation
Alig confidence																						.													.																																							.	.	.
Template Conservation																						.													.																																							.	.	.
Template Sequence		K	F	Q	L	F	I	Q	P	K	L	D	V	L	Q	G	N	I	V	E	Y	.	E	I	L	L	R	D	D	S	A	V	P	R	.	F	P	L	S	E	L	E	A	V	L	A	D	E	E	L	Y	L	A	F	S	E	W	F	S	E	A	F	L	D	V	L	K	K	Y	P	N	D	R	.	.	.	F	A	I	N	I
Template Known Secondary structure												B	T	T	T							.							S		S	S			.											T																							S	T	T	S		.	.	.
Template Predicted Secondary structure																						.													.																																							.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.
		950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.								970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.					990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		S	V	A	G	L	S	S	A	T	L	V	N	D	L	L	E	Q	L	E	N	.	.	.	.	.	.	.	S	P	L	P	P	R	L	L	H	L	I	I	P	A	E	A	I	L	D	H	.	.	.	.	A	E	S	V	Q	K	L	R	L	A	G	C	R	I	V	L	S	Q	V	G	R	D	L	Q	I	F	N	S	L
Query Conservation																						.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																						.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		A	P	Q	Q	L	F	Y	I	E	T	L	H	W	L	D	K	L	K	S	E	S	H	R	I	T	V	E	X	T	E	D	I	F	D	V	P	G	H	K	R	H	L	N	A	N	D	K	N	A	F	I	L	N	K	I	K	V	I	H	G	L	G	Y	H	I	A	I	D	D	V	S	C	G	L	N	S	L	E	R	V
Template Known Secondary structure			G	G	G	G	G	S										T	G	G	G	G	G	G														G	G	G	T	T	S																			T	T							S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		1019	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.		.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		K	A	N	M	A	D	Y	L	L	L	D	G	E	L	C	A	N	V	Q	G	N	L	M	D	.	E	M	L	I	T	I	I	Q	G	H	A	Q	R	L	G	M	K	T	I	A	G	P	V	V	L	P	L	V	M	D	T	L	S	G	I	G	V	D	L	I	Y	G	E	V	I	A	D	A	Q	P	L
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		X	S	Y	L	P	Y	I	I	E	I	K	F	S	L	I	H	F	K	N	I	P	L	E	D	L	L	L	F	I	K	A	W	A	N	F	A	Q	K	N	K	L	D	F	V	V	E	G	I	E	T	K	E	T	X	T	L	L	E	S	H	G	V	S	I	F	Q	G	Y	L	V	N	K	P	F	P	V
Template Known Secondary structure					G	G	G		S						G	G	G	G	T	T	S																			T	T										S	T									T	T			S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions