Job Description P38097 Confidence 75.09% Date Thu Jan 5 11:57:56 GMT 2012 Rank 199 Aligned Residues 119 % Identity 15% Template c3ilhA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:two component response regulator; PDBTitle: crystal structure of two component response regulator from cytophaga2 hutchinsonii Resolution 2.59 Å

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		978	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020						.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		H	L	I	I	P	A	E	A	I	L	D	H	A	E	S	V	Q	K	L	R	L	A	G	C	R	I	V	L	S	Q	V	G	R	D	L	Q	I	F	N	S	L	K	A	.	.	.	.	.	N	M	A	D	Y	L	L	L	D	G	E	L	C	A	N	V	Q	G	N	L	M	D	E	M	L	I	T	I	I	Q	G	H
Query Conservation																																													.	.	.	.	.
Alig confidence																																													.	.	.	.	.												.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		S	V	L	L	I	D	D	D	D	I	V	N	F	L	N	T	T	I	I	R	M	T	H	R	V	E	E	I	Q	S	V	T	S	G	N	A	A	I	N	K	L	N	E	L	Y	A	A	G	R	W	P	S	I	I	C	I	D	I	N	.	.	.	.	.	M	P	G	I	N	G	W	E	L	I	D	L	F	K	Q	H
Template Known Secondary structure								S														T	T										S	S													T	S	S				S						S	S	.	.	.	.	.		S	S	S
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		1053	.	.	.	.	.	.					1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		A	Q	R	L	G	M	K	.	.	.	.	T	I	A	G	P	V	V	L	P	L	V	M	D	T	L	S	G	I	G	V	D	L	I	Y	G	E	V	I	A	D	A	Q	P	L	D	L	L	V	N	S	S	Y	F	A	I	N
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																						.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		F	Q	P	M	K	N	K	S	I	V	C	L	L	S	S	S	L	D	P	R	D	Q	A	K	A	E	A	S	D	W	V	D	.	.	.	.	Y	Y	V	S	K	P	L	T	A	N	A	L	N	N	L	Y	N	K	V	L	N
Template Known Secondary structure			G	G	G	T	T	T								S	S													S	S			.	.	.	.					S	S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions