 |
Job Description | P38097 | Confidence | 51.63% | Date | Thu Jan 5 11:57:56 GMT 2012 |
Rank | 281 | Aligned Residues | 81 |
% Identity | 20% | Template | c3hf3A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:chromate reductase; |
PDBTitle: old yellow enzyme from thermus scotoductus sa-01
|
Resolution | 2.20 Å |
|
 |
  |   |
1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | |
|
|
|
. | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | |
. | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Query Sequence |   |
G | C | R | I | V | L | S | Q | V | G | R | D | L | Q | I | F | . |
. |
. |
. |
. |
. |
. |
N | S | L | K | A | N | M | A | D | Y | L | L | L | D | G | E | L | C | A | N | V | Q | G | N | L | M | . |
. |
. |
. |
D | E | M | L | I | T | I | I | Q | G | H | A | Q | R | L | G | M | K | T | I | A | G | P | . |
V | V | L |
Query Conservation |   |
|   |   |   |   |
|
|
|
|
|   |
|   |
|
|   | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
| . |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   | . | . | . |   |
|
|
|
|   |   |
|
|
|   |
|
Template Sequence |   |
F | V | R | V | S | A | T | D | W | G | E | G | G | W | S | L | E | D | T | L | A | F | A | R | R | L | K | E | L | G | V | D | L | L | D | C | S | S | G | G | V | V | L | R | V | R | I | P | L | A | P | G | F | Q | V | P | F | A | D | A | V | R | K | R | V | . |
. |
. |
G | L | R | T | G | A | V | G | L | I | T | T |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|
|
| S | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
|
| S |
| S | S | S |
|
|
|
|
| T | T | T | T |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |
| S | S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | |
|
|
. | . | 290 | . | . | . | . | . | . | . | . | . |
  |
  |   |
1068 | . | 1070 | . | . | . | . | . | . | . | . | |
. | 1080 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
P | L | V | M | D | T | L | S | G | I | G | . |
V | D | L | I | Y |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
| . |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
|   |   |
|   |
|
|   |
|   |
Template Sequence |   |
P | E | Q | A | E | T | L | L | Q | A | G | S | A | D | L | V | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|