Job Description P38097 Confidence 99.35% Date Thu Jan 5 11:57:56 GMT 2012 Rank 68 Aligned Residues 104 % Identity 11% Template c3fg8B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein rha05790; PDBTitle: crystal structure of pas domain of rha05790 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	A	M	E	Y	S	A	I	G	M	A	L	V	G	T	E	G	Q	W	L	Q	T	N	K	A	L	C	Q	F	L	G	Y	S	Q	E	E	L	R	G	L	T	F	Q	Q	L	T	W	P	E	D	L	N	K	D	L	Q	Q	V	E	K	L	I	S	G	E	I	N	T	Y	S	M	E	K	R	Y	Y	N	R	N
Query Conservation
Alig confidence																																																																				.
Template Conservation																																																																				.
Template Sequence		E	N	L	Y	F	Q	G	G	L	G	F	X	A	L	D	E	D	L	R	I	I	Y	V	N	S	G	C	L	R	H	V	R	R	S	R	D	E	L	L	G	R	V	V	T	E	V	L	P	E	T	Q	G	S	Y	F	D	A	L	C	R	K	V	L	A	T	G	.	R	E	Q	Q	T	R	V	D	S	L	Y	S	P
Template Known Secondary structure				S	S	S		T	T								T	T		B													T							T	T	S	B					S	G	G	G	T	T	S														.										S	S	S	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	V	V	W	A	L	L	A	V	S	L	V	R	H	T	D	G	T	P	L	Y	F	I	A	Q	I	E	D	I	N	E	L
Query Conservation
Alig confidence			.	.													.	.	.	.	.	.
Template Conservation			.	.													.	.	.	.	.	.
Template Sequence		G	.	.	X	T	I	E	V	T	A	A	A	D	S	G	.	.	.	.	.	.	A	L	V	V	H	F	R	D	V	T	A	E
Template Known Secondary structure		T	.	.											T	T	.	.	.	.	.	.										T	T
Template Predicted Secondary structure			.	.													.	.	.	.	.	.
Template SS confidence
		200			.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions