Job Description P38097 Confidence 99.75% Date Thu Jan 5 11:57:56 GMT 2012 Rank 28 Aligned Residues 219 % Identity 16% Template c3ewkA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:sensor protein; PDBTitle: structure of the redox sensor domain of methylococcus capsulatus2 (bath) mmos Resolution 2.34 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	L	V	G	T	E	G	Q	W	L	Q	T	N	K	A	L	C	Q	F	L	G	Y	S	Q	E	E	L	R	G	L	T	F	Q	Q	L	T	W	P	E	D	L	N	K	D	L	Q	Q	V	E	K	L	I	S	G	E	I	N	T	Y	S	M	E	K	R	Y	Y	N	R	N	G	D	V	V	W	A	L	L	A	V
Query Conservation
Alig confidence																																																										.
Template Conservation																																																										.
Template Sequence		V	S	I	T	D	L	Q	G	R	I	L	Y	A	N	D	N	F	C	A	V	S	R	Y	G	R	E	E	L	V	G	Q	D	H	R	I	V	N	S	G	Y	H	G	K	A	Y	I	R	D	M	W	R	T	I	S	R	G	.	N	I	W	Q	G	E	F	C	N	R	R	K	D	G	T	R	Y	W	V	D	S	T	I
Template Known Secondary structure							T	T		B												T	T							T	T	S	B	G	G	G	G			S		S													T	T	T	.												S	S	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	V	R	H	T	D	G	T	P	L	Y	F	I	A	Q	I	E	D	I	N	E	L	K	R	T	E	Q	V	N	Q	Q	L	M	E	R	I	T	L	A	N	E	A	G	G	I	G	I	W	E	W	E	L	K	P	N	I	F	S	W	D	K	R	M	F	E	L	Y	E	I	P	P	H	I	K	P	N	W	Q	V
Query Conservation
Alig confidence																																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		V	P	L	M	D	N	A	G	K	P	R	Q	Y	I	S	I	R	R	D	I	T	A	Q	K	E	A	E	A	Q	L	.	.	.	.	A	R	L	K	Q	A	M	D	A	N	S	E	M	I	L	L	T	D	R	A	G	R	I	I	Y	A	N	P	A	L	C	R	F	S	G	M	A	E	G	E	L	L	G	Q	S	P
Template Known Secondary structure							S	S	S													T	T	T	T							.	.	.	.									T			S							T	T	S														T			T					S	S		G
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510								.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.
Query Sequence		W	Y	E	C	V	L	P	E	D	R	Q	H	A	E	K	V	I	R	D	S	L	Q	S	R	S	P	F	K	L	E	F	R	I	T	V	K	.	.	.	.	.	.	.	D	G	I	R	H	I	R	A	L	A	N	R	V	L	N	K	E	G	E	V	E	R	L	L	G	I	N	M	D
Query Conservation																																						.	.	.	.	.	.	.
Alig confidence			.																																			.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		S	.	I	L	D	S	P	L	A	D	Q	E	T	L	A	A	M	Q	E	A	L	Q	A	G	Q	P	W	S	G	R	L	L	N	R	R	R	T	G	P	A	P	H	D	A	E	D	Y	W	A	E	I	S	T	T	P	I	H	T	D	G	N	G	L	V	G	Y	V	Q	I	Q	H	D
Template Known Secondary structure		G	.	G	G	B		T	T	S															T															S	S	S	S																	S	S	S
Template Predicted Secondary structure			.
Template SS confidence
		255		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions