Job Description P38097 Confidence 99.22% Date Thu Jan 5 11:57:56 GMT 2012 Rank 74 Aligned Residues 141 % Identity 14% Template c3cloC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution Resolution 2.04 Å

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		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.									.	.	.	350	.	.
Predicted Secondary structure																																								.																												.	.	.	.	.	.	.	.
Query SS confidence																																								.																												.	.	.	.	.	.	.	.
Query Sequence		I	M	T	M	V	M	Y	A	F	R	A	E	R	K	H	I	S	E	S	E	T	H	F	R	N	A	M	E	Y	S	A	I	G	M	A	L	V	G	.	T	E	G	Q	W	L	Q	T	N	K	A	L	C	Q	F	L	G	Y	S	Q	E	E	L	R	G	L	T	.	.	.	.	.	.	.	.	F	Q	Q	L	T	W
Query Conservation																																								.																												.	.	.	.	.	.	.	.
Alig confidence																																								.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Y	A	T	H	P	T	A	H	E	A	L	D	G	I	V	E	Q	H	Q	Q	F	V	R	S	L	T	E	V	N	G	G	C	A	V	I	S	D	L	S	N	R	K	S	Y	V	T	V	H	P	W	A	N	F	L	G	L	T	P	E	E	A	A	L	S	V	I	D	S	X	D	E	D	C	I	Y	R	R	I	H
Template Known Secondary structure					T	S	G	G	G	G	S																					S								T	T	T	T								T	T		G	G	G												T	T				T					T	T	B
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.										.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																														.
Query SS confidence																	.	.	.	.	.	.	.	.	.																														.
Query Sequence		P	E	D	L	N	K	D	L	Q	Q	V	E	K	L	I	.	.	.	.	.	.	.	.	.	S	G	E	I	N	T	Y	S	M	E	K	R	Y	Y	N	R	N	G	D	V	V	W	A	L	L	A	V	S	L	.	V	R	H	T	D	G	T	P	L	Y	F	I	A	Q	I	E	D	I	N	E	L	K	R	T	E	Q
Query Conservation																	.	.	.	.	.	.	.	.	.																														.
Alig confidence																	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		P	E	D	L	V	E	K	R	L	X	E	Y	K	F	F	Q	K	T	F	S	X	S	P	G	E	R	L	K	Y	R	G	R	C	R	L	R	X	X	N	E	K	G	V	Y	Q	Y	I	D	N	L	V	Q	I	X	Q	N	T	P	A	G	N	V	W	L	I	F	C	L	Y	S	L	S	A	D	Q	R	P	E	Q	G
Template Known Secondary structure																					T	S						T	T												T	T	S																T	T	S													S						S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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