Job Description P38097 Confidence 96.42% Date Thu Jan 5 11:57:56 GMT 2012 Rank 84 Aligned Residues 75 % Identity 16% Template c3c2wB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:bacteriophytochrome; PDBTitle: crystal structure of the photosensory core domain of p.2 aeruginosa bacteriophytochrome pabphp in the pfr state Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	A	L	V	G	T	E	G	Q	W	L	Q	T	N	K	A	L	C	Q	F	L	G	Y	S	Q	E	E	L	R	G	L	T	F	Q	Q	L	T	W	P	E	D	L	N	K	D	L	Q	Q	V	E	K	L	I	S	G	E	I	N	T	Y	S	M	E	K	R	Y	Y	N	R	N	G	D	V	V	W	A	L	L	A
Query Conservation
Alig confidence																																				.																.	.	.	.	.	.
Template Conservation																																				.																.	.	.	.	.	.
Template Sequence		A	L	V	T	L	R	A	D	G	M	V	L	A	A	S	E	N	I	Q	A	L	L	G	F	V	A	S	P	G	S	Y	L	T	Q	.	E	Q	V	G	P	E	V	L	R	M	L	E	E	G	L	.	.	.	.	.	.	T	G	N	G	P	W	S	N	S	V	E	T	R	I	G	E	H	L	F	D	V	I	G	H
Template Known Secondary structure								T	T		B						T	T					S	S	S				T	T		B				.																.	.	.	.	.	.	T			S											S	S	S
Template Predicted Secondary structure																																				.																.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		394	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		101	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions