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Job DescriptionP38097
Confidence38.28%DateThu Jan 5 11:57:56 GMT 2012
Rank338Aligned Residues139
% Identity19%Templatec3bdkB_
PDB info PDB header:lyaseChain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   956...960.........970.........980......... 990.........1000........
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Query Sequence  SATLVNDLLEQLENSPLPPRLLHLIIPAEAILDH. . . . . . . . . . . . . . . . AESVQKLRLAGCRIVLSQV. . . . . . . . . . .
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Template Sequence  PLENILELKKMVEEAG. . . . . LEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYNFMPVFDWTRSDL
Template Known Secondary structure 
TT.....





T
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S


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   62.......70....... ..80.........90.........100.........110.........120.........130......
 
   10091010.........1020.........1030.........1040 .........1050.........1060.... ..
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Query Sequence  . . . . . . GRDLQIFNSLKANMADYLLLDGELCANVQGNL. . . MDEMLITIIQGHAQRLGMKTIAGP. . . . . . . . . . . . . VV
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Template Sequence  HHPLPDGSTSLAFLKSDLAGVDPVAIIENYRQNISEEDLWANLEYFIKAILPTAEEAGVKMAIHPDDPPYGIFGLPRIIT
Template Known Secondary structure  S


TTS
B

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T

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   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   1067..1070..... ....1080.........1090. ........
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Query Sequence  LPLVMDTLS. . . . . . GIGVDLIYGEVIADAQ. PLDLLVNS
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Template Sequence  GQEAVERFLNLYDSEHNGITMCVGSYASDPKNDVLAMTEY
Template Known Secondary structure  STTS
STTTTSTT

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   236...240.........250.........260.........270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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