Job Description P38097 Confidence 98.47% Date Thu Jan 5 11:57:56 GMT 2012 Rank 83 Aligned Residues 140 % Identity 10% Template c2veaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phytochrome-like protein cph1; PDBTitle: the complete sensory module of the cyanobacterial2 phytochrome cph1 in the pr-state. Resolution 2.21 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		M	A	L	V	G	T	E	G	Q	W	L	Q	T	N	K	A	L	C	Q	F	L	G	Y	S	Q	E	E	L	R	G	L	T	F	Q	Q	L	T	W	P	E	D	L	N	K	D	L	Q	Q	V	E	.	.	K	L	I	S	G	E	I	N	T	Y	S	M	E	K	R	Y	Y	N	R	N	G	D	V	V	W	A	L	L
Query Conservation																																																				.	.
Alig confidence																																																				.	.
Template Conservation
Template Sequence		V	V	L	Q	E	P	D	L	T	I	S	Q	I	S	A	N	C	T	G	I	L	G	R	S	P	E	D	L	L	G	R	T	L	G	E	V	F	D	S	F	L	T	A	G	Q	I	S	S	L	N	P	S	K	L	W	A	R	V	M	D	F	V	I	F	D	G	V	F	H	R	N	S	D	G	L	L	V	C	E	L
Template Known Secondary structure						T	T	T	T							T	T					T	S			T	T	T	S	S	T	T	T	T	T	T	T	S	B						T	T					S	S																					S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	S	L	V	R	H	T	D	G	T	P	L	Y	F	I	A	Q	I	E	D	I	N	E	L	K	R	T	E	Q	V	N	Q	Q	L	M	E	R	I	T	L	A	N	E	A	G	G	I	G	I	W	E	W	E	L	K	P	N	I	F	S	W	D
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		E	P	A	Y	T	S	D	N	L	P	F	L	G	.	F	Y	H	M	A	N	A	A	L	N	R	L	N	L	R	D	F	Y	D	V	I	V	E	E	V	R	R	M	T	G	F	D	R	V	M	L	Y	R	F	D	E	N	N	H	G	D	V	I	A
Template Known Secondary structure						T	T	S			S	T	T	T	.	T	T																														S									T	T	S
Template Predicted Secondary structure															.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions