Job Description P38097 Confidence 72.64% Date Thu Jan 5 11:57:56 GMT 2012 Rank 208 Aligned Residues 135 % Identity 14% Template c2otdC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:glycerophosphodiester phosphodiesterase; PDBTitle: the crystal structure of the glycerophosphodiester phosphodiesterase2 from shigella flexneri 2a Resolution 2.60 Å

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		931	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.			1000	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		F	Q	Q	A	A	K	A	V	A	S	K	G	I	S	I	S	L	P	L	S	V	A	G	L	S	S	A	T	L	V	N	D	L	L	E	Q	L	E	N	S	P	L	P	P	R	L	L	H	L	I	I	P	A	E	A	I	L	D	H	A	E	S	V	Q	K	L	R	L	A	.	.	G	C	R	I	V	L	S	Q	V
Query Conservation																																																																							.	.
Alig confidence																																																							.	.	.	.	.	.											.	.
Template Conservation																																																							.	.	.	.	.	.
Template Sequence		L	S	Q	V	A	E	R	C	R	E	H	G	X	X	A	N	I	E	I	K	P	T	T	G	T	G	P	L	T	G	K	X	V	A	L	A	A	R	Q	L	W	A	G	X	T	P	P	L	L	S	S	F	E	.	.	.	.	.	.	I	D	A	L	E	A	A	Q	Q	A	A	P	E	L	P	R	G	L	L	L	D
Template Known Secondary structure													T											T	T																	T	T	T	S								S		.	.	.	.	.	.												T	T	S							S
Template Predicted Secondary structure																																																							.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		1009	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	D	L	Q	I	F	N	S	L	K	A	N	M	A	D	Y	L	L	L	D	G	E	L	C	A	N	V	Q	G	N	L	M	D	E	M	L	I	T	I	I	Q	G	H	A	Q	R	L	G	M	K	T	I	A	G	P	V	V	L	P	L	V	M	D	T	L	S	G	I	G	V	D	L	I	Y
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	W	R	D	D	W	R	E	L	T	A	R	L	G	C	V	S	I	H	L	N	H	K	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	K	A	R	V	X	Q	L	K	D	A	G	L	R	I	L	V	Y	T	V	N	K	P	Q	H	A	A	E	L	L	R	W	G	V	D	C	I	C
Template Known Secondary structure		S			T	T									T		S						G	G	G			.	.	.	.	.	.	.	.	.	.	.	.										T	T																					T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.													.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions