Job Description P38097 Confidence 99.62% Date Thu Jan 5 11:57:56 GMT 2012 Rank 42 Aligned Residues 110 % Identity 11% Template c2kdkA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:aryl hydrocarbon receptor nuclear translocator-like protein PDBTitle: structure of human circadian clock protein bmal2 c-terminal pas domain Resolution UNK

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	A	I	G	M	A	L	V	G	T	E	G	Q	W	L	Q	T	N	K	A	L	C	Q	F	L	G	Y	S	Q	E	E	L	R	G	L	T	F	Q	Q	L	T	W	P	E	D	L	N	K	D	L	Q	Q	V	E	K	L	I	S	G	E	I	N	T	Y	S	M	E	K	R	Y	Y	N	R	N	G	D	V	V	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	T	E	F	I	T	R	F	A	V	N	G	K	F	V	Y	V	D	Q	R	A	T	A	I	L	G	Y	L	P	Q	E	L	L	G	T	S	C	Y	E	Y	F	H	Q	D	D	H	N	N	L	T	D	K	H	K	A	V	L	Q	S	K	E	K	I	L	T	D	S	Y	K	F	R	A	K	D	G	S	F	V	T
Template Known Secondary structure			S	S								T	T	S	B						T						T				T	T	T	S	B	T	S	B	T	T	T	T	B		S	S	S													T	S	S	S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		A	L	L	A	V	S	L	V	R	H	.	T	D	G	T	P	L	Y	F	I	A	Q	I	E	D	I	N	E	L	K	R
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		L	K	S	Q	W	F	S	F	T	N	P	D	T	K	E	L	E	Y	I	V	S	V	N	T	L	V	L	G	H	S	E
Template Known Secondary structure													S	S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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