Job Description P38097 Confidence 92.66% Date Thu Jan 5 11:57:56 GMT 2012 Rank 113 Aligned Residues 103 % Identity 10% Template c2jk1A_ PDB info PDB header:dna-binding Chain: A: PDB Molecule:hydrogenase transcriptional regulatory protein hupr1; PDBTitle: crystal structure of the wild-type hupr receiver domain Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		991	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	V	Q	K	L	R	L	A	G	C	R	I	V	L	S	Q	V	G	R	D	L	Q	I	F	N	S	L	K	A	N	M	A	D	Y	L	L	L	D	G	E	L	C	A	N	V	Q	G	N	L	M	D	E	M	L	I	T	I	I	Q	G	H	A	Q	R	L	G	M	K	T	I	A	G	P	V	V	L	P	L	V
Query Conservation
Alig confidence																	.	.																										.	.	.	.	.
Template Conservation																	.	.																										.	.	.	.	.
Template Sequence		A	A	M	K	L	A	L	E	D	D	F	D	V	L	T	.	.	A	Q	G	A	E	A	A	I	A	I	L	E	E	E	W	V	Q	V	I	I	C	D	Q	R	M	.	.	.	.	.	P	G	R	T	G	V	D	F	L	T	E	V	R	E	R	W	P	E	T	V	R	I	I	I	T	G	Y	T	D	S	A	S	M
Template Known Secondary structure									T	T	T	S					.	.		S	S											S									S			.	.	.	.	.	S	S	S														T	T	S							S		T	T
Template Predicted Secondary structure																	.	.																										.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		1071	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	T	L	S	G	I	G	V	D	L	I	Y	G	E	V	I	A	D	A	Q	P	L	D	L	L	V	N	S	S	Y	F	A	I
Query Conservation
Alig confidence												.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		M	A	A	I	N	D	A	G	I	H	.	.	.	.	Q	F	L	T	K	P	W	H	P	E	Q	L	L	S	S	A	R	N	A	A
Template Known Secondary structure								T	T			.	.	.	.					S	S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions