Return to main results Retrieve Phyre Job Id

Job DescriptionP38097
Confidence63.34%DateThu Jan 5 11:57:56 GMT 2012
Rank232Aligned Residues118
% Identity13%Templatec2gwrA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:dna-binding response regulator mtra; PDBTitle: crystal structure of the response regulator protein mtra from2 mycobacterium tuberculosis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   975....980.........990.........1000.........1010.........1020.........1030.........1040.........1050....
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  RLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQ
Query Conservation    
  

 
         
  
   
    




 
 

   
     
 



                   
   
 
Alig confidence 






























..























.....














..
Template Conservation   
 






       
   
   
  
  ..     


        






 .....

   
      

 .. 
Template Sequence  XRQRILVVDDDASLAEXLTIVLRGEGFDTAV. . IGDGTQALTAVRELRPDLVLLDLX. . . . . LPGXNGIDVCRVLRA. . D
Template Known Secondary structure 



S
TT
..

GGG

SSS.....
SSS
T..T
Template Predicted Secondary structure 








..








.....









..
Template SS confidence 















































































   4.....10.........20.........30.... .....40.........50........ .60.........70... .
 
   1055....1060.........1070.........1080.........1090.........1100.....
Predicted Secondary structure 






















Query SS confidence 


















































Query Sequence  RLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN
Query Conservation        





       
   
    

     
               
Alig confidence 

























....




















Template Conservation      

  
          
   
  .... 

 

     
   
     
Template Sequence  SGVPIVXLTAKTDTVDVVLGLESGAD. . . . DYIXKPFKPKELVARVRARLR
Template Known Secondary structure 



TT

S
TT

....S



Template Predicted Secondary structure 

















....












Template SS confidence 


















































   75....80.........90.........100 .........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions