Return to main results Retrieve Phyre Job Id

Job DescriptionP52612
Confidence92.57%DateThu Jan 5 12:05:51 GMT 2012
Rank266Aligned Residues221
% Identity11%Templated1w5sa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  RPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSP
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Template Sequence  RLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKR. . . . . . . . . . . . . . . . . . . . . VSEAAAKEGLTVKQAYVNAFNAPN
Template Known Secondary structure  TSS
B


TT

SSS.....................TT

GGG

S
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   41........50.........60.........70..... ....80.........90.........
 
   244.....250..... ....260.........270.........280.........290.........300......
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Query Sequence  LLRMQGAAYATR. . . . . . . . . . . . . . . . . IAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP
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Template Sequence  LYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLS. . . . . . . . . . . . . . SPRIAAEDLYTLL
Template Known Secondary structure  T




TT

T
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   100.........110.........120.........130.........140.........150.. .......160.....
 
   307..310.........320.........330.........340.........350.........360.........370..... ....380....
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Query Sequence  ALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRA. . MTALISEQH
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Template Sequence  RVHEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRE. . . . LYTILEQRAELGLRDTVWEPRH
Template Known Secondary structure  TS

TTS

BT
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   166...170.........180.........190.........200.........210......... 220.........230.........240.
 
   385....390 .........400.........410.........420...
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Query Sequence  YARVRT. . . . . . . . . . . FKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIA
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Template Conservation     
           
  
 
  

  
   
   
   
    
  
  
Template Sequence  LELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVS
Template Known Secondary structure 
GGGTS


TT
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   242.......250.........260.........270.........280.........290.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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