Job Description P52612 Confidence 95.46% Date Thu Jan 5 12:05:51 GMT 2012 Rank 89 Aligned Residues 100 % Identity 18% Template c3iytG_ PDB info PDB header:apoptosis Chain: G: PDB Molecule:apoptotic protease-activating factor 1; PDBTitle: structure of an apoptosome-procaspase-9 card complex Resolution 9.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																					.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																	.	.																					.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		V	R	P	I	N	A	L	L	T	V	G	R	G	Q	R	.	.	M	G	L	F	A	G	S	G	V	G	K	S	V	L	L	G	M	M	A	R	.	.	.	.	.	.	Y	T	R	A	D	V	I	V	V	G	L	I	G	E	R	G	.	.	.	.	.	R	E	V	K	D	F	I	E	N	I	L	G	A	E	G	R
Query Conservation																	.	.																					.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																	.	.																					.	.	.	.	.	.																	.	.	.	.	.															.	.
Template Conservation																																																																																.	.
Template Sequence		V	N	A	I	Q	Q	K	L	S	K	L	K	G	E	P	G	W	V	T	I	H	G	M	A	G	C	G	K	S	V	L	A	A	E	A	V	R	D	H	S	L	L	E	G	C	F	P	G	G	V	H	W	V	S	V	G	K	Q	D	K	S	G	L	L	M	K	L	Q	N	L	C	T	R	L	D	Q	D	E	.	.
Template Known Secondary structure										T	T	S	T	T	S										T	T	S	S																				T	T									S																			S	S		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	S	V	V	I	A	A	P	A	D	V	S	P	L	L	R	M	Q	G	A	A	Y	A	T	R	I	A	E	D	F	R	D	R	G	Q	H	V	L	L	I	M	D	S	L
Query Conservation
Alig confidence		.	.	.	.																							.	.	.	.	.	.
Template Conservation		.	.	.	.																							.	.	.	.	.	.
Template Sequence		.	.	.	.	S	F	S	Q	R	L	P	L	N	I	E	E	A	K	D	R	L	R	I	L	M	L	.	.	.	.	.	.	R	K	H	P	R	S	L	L	I	L	D	D	V
Template Known Secondary structure		.	.	.	.		S		S	S				S														.	.	.	.	.	.		T		T	T
Template Predicted Secondary structure		.	.	.	.																							.	.	.	.	.	.
Template SS confidence
						211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions