Job Description P52612 Confidence 93.15% Date Thu Jan 5 12:05:51 GMT 2012 Rank 233 Aligned Residues 93 % Identity 15% Template c3dm5A_ PDB info PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 2.51 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		L	L	T	V	G	R	G	Q	R	M	G	L	F	A	G	S	G	V	G	K	S	V	L	L	G	M	M	A	R	Y	.	.	T	R	A	D	V	I	V	V	G	L	I	G	E	R	G	R	E	V	K	D	F	I	E	N	I	L	G	A	E	G	R	A	R	S	V	V	I	A	A	P	A	D	V	S	P	L	L	R
Query Conservation																																.	.
Alig confidence																																.	.																													.	.
Template Conservation																																																														.	.
Template Sequence		I	E	I	K	E	K	P	T	I	L	L	M	V	G	I	Q	G	S	G	K	T	T	T	V	A	K	L	A	R	Y	F	Q	K	R	G	Y	K	V	G	V	V	C	S	D	T	W	R	P	G	A	Y	H	Q	L	R	Q	L	L	D	R	.	.	Y	H	I	E	V	F	G	N	P	Q	E	K	D	A	I	K	L	A
Template Known Secondary structure						S	S	S									T	T	S	S														T	T	T											S	S	T											G	G	.	.	G	T							T	T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	G	A	A	Y	A	T	R	I	A	E	D	F	R	D	R	G	Q	H	V	L	L	I
Query Conservation
Alig confidence						.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.
Template Sequence		K	E	G	V	.	.	.	.	.	.	.	D	Y	F	K	S	K	G	V	D	I	I	I	V
Template Known Secondary structure						.	.	.	.	.	.	.						T	T		S
Template Predicted Secondary structure						.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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