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Job DescriptionP52612
Confidence95.19%DateThu Jan 5 12:05:51 GMT 2012
Rank104Aligned Residues106
% Identity8%Templatec3bosA_
PDB info PDB header:hydrolase regulator,dna binding proteinChain: A: PDB Molecule:putative dna replication factor; PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADV. . IVVGLIGERGREVKDFIENILGAEGRARSVVIAAPAD
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Template Sequence  IGALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPLGIHAS. . . . . ISTALLEGLEQFDLICIDDVD
Template Known Secondary structure  T
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STTSSTT

GGGGGG.....S
GGGGTTGGGSSTGG
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   3940.........50.........60.........70.........80.........90.. .......100.........110...
 
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Query Sequence  VSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDS
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Template Sequence  AVAGHPLWEEAIFDLYNRVAEQKRGSLIVSASA
Template Known Secondary structure  GGTT

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   114.....120.........130.........140......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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