Return to main results Retrieve Phyre Job Id

Job DescriptionP52612
Confidence95.74%DateThu Jan 5 12:05:51 GMT 2012
Rank80Aligned Residues60
% Identity15%Templatec3bgwD_
PDB info PDB header:replicationChain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase
Resolution3.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170. ........180.........190........ .200.........210........
Predicted Secondary structure 





.











..






Query SS confidence 












.


























. .



















Query Sequence  LDTGVRPINALLT. VGRGQRMGLFAGSGVGKSVLLGMMARY. . TRADVIVVGLIGERGREVKD
Query Conservation 
 






 
 
.

 


  
 
  
 


 

  

  ..   

 
  




  

 
Alig confidence 












.


























..



















Template Conservation 
 

   

    
   
 
  
 
 

 


 
   

   
  
  

  
 

       
Template Sequence  VPSGFTELDRMTYGYKRRNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENIK
Template Known Secondary structure  B

S
SSB
SS

SSSSTT

SSS
Template Predicted Secondary structure 
























Template SS confidence 






























































   178.180.........190.........200.........210.........220.........230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions