Return to main results Retrieve Phyre Job Id

Job DescriptionP52612
Confidence97.88%DateThu Jan 5 12:05:51 GMT 2012
Rank41Aligned Residues106
% Identity18%Templatec2recB_
PDB info PDB header:helicasePDB COMPND:
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170... ......180.........190. ........200.........210.........220.........230..
Predicted Secondary structure 









...








.














Query SS confidence 
















. . .

















.








































Query Sequence  HVLDTGVRPINALLTVG. . . RGQRMGLFAGSGVGKSVL. LGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARS
Query Conservation   

 






 
 


... 


  
 
  
 


 
.
  

     

 
  




  

 
          
 

Alig confidence 
















...

















.
























....











Template Conservation    
 

   

  

 

   
 
  
 
 

 




 
         
  




 
     ....     

 
   
Template Sequence  ETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP. . . . IYARKLGVDIDN
Template Known Secondary structure 


S
TTSSSSTTS



TTSSTT


SS



....TT

TTT
Template Predicted Secondary structure 





























....



Template SS confidence 















































































   38.40.........50.........60.........70.........80.........90.........100. ........110...
 
   233......240.........250.........260.........270.....
Predicted Secondary structure 










Query SS confidence 










































Query Sequence  VVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLT
Query Conservation 


  


     
  
   
 







 
  



 



Alig confidence 







.........

























Template Conservation 
       ......... 
        

      






 
Template Sequence  LLCSQPDT. . . . . . . . . GEQALEICDALARSGAVDVIVVDSVA
Template Known Secondary structure 


SS.........T


S
TT
Template Predicted Secondary structure 


.........





Template SS confidence 










































   114.....120. ........130.........140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions