Job Description P52612 Confidence 100.00% Date Thu Jan 5 12:05:51 GMT 2012 Rank 15 Aligned Residues 343 % Identity 45% Template c2oblA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:escn; PDBTitle: structural and biochemical analysis of a prototypical atpase from the2 type iii secretion system of pathogenic bacteria Resolution 1.80 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		K	Q	L	P	L	G	P	A	L	L	G	R	V	L	D	G	S	G	K	P	L	D	G	L	P	S	P	.	D	T	T	E	T	G	A	L	I	T	P	P	F	N	P	L	Q	R	T	P	I	E	H	V	L	D	T	G	V	R	P	I	N	A	L	L	T	V	G	R	G	Q	R	M	G	L	F	A	G	S	G	V
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		H	K	I	R	V	G	D	A	L	L	G	R	L	I	D	G	I	G	R	P	M	E	S	N	I	V	A	P	Y	L	P	F	E	R	S	L	Y	A	E	P	P	D	P	L	L	R	Q	V	I	D	Q	P	F	I	L	G	V	R	A	I	D	G	L	L	T	C	G	I	G	Q	R	I	G	I	F	A	G	S	G	V
Template Known Secondary structure								G	G	G	T	T					T	T	S		B		S			S	S										S					S		S	T	T						S					S								S				T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	S	V	L	L	G	M	M	A	R	Y	T	R	A	D	V	I	V	V	G	L	I	G	E	R	G	R	E	V	K	D	F	I	E	N	I	L	G	A	E	G	R	A	R	S	V	V	I	A	A	P	A	D	V	S	P	L	L	R	M	Q	G	A	A	Y	A	T	R	I	A	E	D	F	R	D	R	G	Q	H
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		G	K	S	T	L	L	G	M	I	C	N	G	A	S	A	D	I	I	V	L	A	L	I	G	E	R	G	R	E	V	N	E	F	L	A	L	L	P	Q	.	S	T	L	S	K	C	V	L	V	V	T	T	S	D	R	P	A	L	E	R	M	K	A	A	F	T	A	T	T	I	A	E	Y	F	R	D	Q	G	K	N
Template Known Secondary structure		S												S			S								S											T	T	S			.				T	T								T	T	S																					T	T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	I	M	D	S	L	T	R	Y	A	M	A	Q	R	E	I	A	L	A	I	G	E	P	P	A	T	K	G	Y	P	P	S	V	F	A	K	L	P	A	L	V	E	R	A	G	N	G	I	S	G	G	G	S	I	T	A	F	Y	T	V	L	T	E	G	D	D	Q	Q	D	P	I	A	D	S	A	R	A	I
Query Conservation
Alig confidence																																																		.	.
Template Conservation																																																		.	.
Template Sequence		V	L	L	M	M	D	S	V	T	R	Y	A	R	A	A	R	D	V	G	L	A	S	G	E	P	D	V	R	G	G	F	P	P	S	V	F	S	S	L	P	K	L	L	E	R	A	G	P	.	.	A	P	K	G	S	I	T	A	I	Y	T	V	L	L	E	S	D	N	V	N	D	P	I	G	D	E	V	R	S	I
Template Known Secondary structure								T															T	T					B	T	T	B													T	T				.	.		S	S	S												S	S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	G	H	I	V	L	S	R	R	L	A	E	A	G	H	Y	P	A	I	D	I	E	A	S	I	S	R	A	M	T	A	L	I	S	E	Q	H	Y	A	R	V	R	T	F	K	Q	L	L	S	S	F	Q	R	N	R	D	L	V	S	V	G	A	Y	A	K	G	S	D	P	M	L	D	K	A	I	A	L	W	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	G	H	I	V	L	T	R	E	L	A	E	E	N	H	F	P	A	I	D	I	G	L	S	A	S	R	V	M	H	N	V	V	T	S	E	H	L	R	A	A	A	E	C	K	K	L	I	A	T	Y	K	N	P	E	L	L	I	R	I	G	E	Y	T	M	G	Q	D	P	E	A	D	K	A	I	K	N	R	K
Template Known Secondary structure			S					B						T	T	T		S	S		B		G	G	G				T	T					S																					T					T	T	T						S										T
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	E	G	Y	L	Q	Q	G	I	F	E	R	A	D	W	E	A	S	L	Q	G	L	E	R	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	Q	N	F	I	Q	Q	S	T	K	D	I	S	S	Y	E	K	T	I	E	S	L	F	K	V	V
Template Known Secondary structure											T	T																T
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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