Job Description P52612 Confidence 97.86% Date Thu Jan 5 12:05:51 GMT 2012 Rank 42 Aligned Residues 180 % Identity 15% Template c2dr3A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0273 protein ph0284; PDBTitle: crystal structure of reca superfamily atpase ph0284 from pyrococcus2 horikoshii ot3 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		159	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure															.	.																												.	.																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																												.	.																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	T	G	V	R	P	I	N	A	L	L	T	.	.	V	G	R	G	Q	R	M	G	L	F	A	G	S	G	V	G	K	S	V	L	L	G	M	M	A	R	Y	.	.	T	R	A	D	V	I	V	V	G	L	I	G	E	R	G	R	E	V	K	D	F	I	E	N	I	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.																												.	.																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																												.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	T	G	I	P	G	V	D	E	I	L	H	G	G	I	P	E	R	N	V	V	L	L	S	G	G	P	G	T	G	K	T	I	F	S	Q	Q	F	L	W	N	G	L	K	M	G	E	P	G	I	Y	V	A	L	E	E	H	P	V	Q	V	R	Q	N	M	A	Q	F	G	W	D	V	K	P	Y	E	E	K	G
Template Known Secondary structure							T	T					T	T	T	S			T	T									T	T	S	S															T	T								S	S	S											T	T	T										T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
								224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	L	G	A	E	G	R	A	R	S	V	V	I	A	A	P	A	D	V	S	P	L	L	R	M	Q	G	A	A	Y	A	T	R	I	A	E	D	F	R	D	R	G	Q	H	V	L	L	I	M	D	S	L	T	R	Y	A	M	A	Q	R	E	I	A	L	A	I	G	E	P	P	A	T	K	G	Y
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																									.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	F	A	M	V	D	A	F	T	A	G	I	G	K	E	Y	E	K	Y	I	V	H	D	L	T	D	I	R	E	F	.	.	.	.	.	.	I	E	V	L	R	Q	A	I	R	D	I	N	A	K	R	V	V	V	D	S	V	T	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	N	K
Template Known Secondary structure		S							S	T	T	T	T						S		B		S			S	S					.	.	.	.	.	.												T								T	S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																	.	140	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	S	V	F	A	K	L	P	A	L	V	E	R	A	G	N	G	I	S	G	G	G	S	I	T	A	F	Y	T	V	L	T	E	G	D	D	Q	Q	D	P	I	A	D	S	A	R	A	I	L	D	G	H	I	V	L	S	R	R	L	A	E	A	G	H	Y	P	A	I	D	I	E	A	S
Query Conservation
Alig confidence																			.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																			.	.	.	.	.																		.	.	.	.	.	.
Template Sequence		P	A	M	A	R	S	I	I	L	Q	L	K	R	V	L	A	G	.	.	.	.	.	T	G	C	T	S	I	F	V	S	Q	V	S	G	F	G	P	G	.	.	.	.	.	.	V	E	H	G	V	D	G	I	I	R	L	D	L	D	E	I	D	G	E	L	K	R	S	L	I	V	W	K	M
Template Known Secondary structure		G	G	G															.	.	.	.	.	T	T																.	.	.	.	.	.					S	S											T	T
Template Predicted Secondary structure																			.	.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions