Job Description P52612 Confidence 93.40% Date Thu Jan 5 12:05:51 GMT 2012 Rank 221 Aligned Residues 129 % Identity 20% Template c2dfsA_ PDB info PDB header:contractile protein/transport protein Chain: A: PDB Molecule:myosin-5a; PDBTitle: 3-d structure of myosin-v inhibited state Resolution 24.00 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	T	C	V	I	E	R	Q	N	G	S	E	T	H	E	V	E	S	E	V	V	G	F	N	G	Q	R	L	F	L	M	P	L	E	E	V	E	G	V	L	P	G	A	R	V	Y	A	K	N	I	S	A	E	G	L	Q	S	G	K	Q	L	P	L	G	P	A	L	L	G	R	V	L	D	G	S	G	K	P	L
Query Conservation
Alig confidence													.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	R	V	W	I	P	D	P	E	E	.	.	.	V	W	K	S	A	E	L	L	K	D	Y	K	P	G	D	K	V	L	Q	L	R	L	E	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	L	E	Y	C	L	D	P	K	T	K	E	L	P	P	L	R	N	P	D	I	L
Template Known Secondary structure		T								T	T	T	.	.	.								S	S				T	T		S							S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								T	T	T						B				G	G	G
Template Predicted Secondary structure													.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.																								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																			.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	L	P	S	P	D	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	G	A	L	I	T	P	P	F	N	P	L	Q	R	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	H	V	L	D	T	G	V	R	P	I	N
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	E	N	D	L	T	A	L	S	Y	L	H	E	P	A	V	L	H	N	L	K	V	R	F	I	D	S	K	L	I	Y	T	Y	C	G	I	V	L	V	A	I	N	P	Y	E	Q	L	P	I	Y	G	E	D	I	I	N	A	Y	S	G	Q	N	M	G	D	M	D	P	H	I	F	A	V	A	E	E	A	Y	K
Template Known Secondary structure		S	S		S	B	S	T	T		S	S		S														T	T								T	T								S	S			S		S	S								T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	T	V	G	R	G	Q	R	M	G	L	F	A	G	S	G	V	G	K	S	V	L	L	G	M	M	A	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	M	A	R	D	E	R	N	Q	S	I	I	V	S	G	E	S	G	A	G	K	T	V	S	A	K	Y	A	M	R	Y
Template Known Secondary structure							T										S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions