Return to main results Retrieve Phyre Job Id

Job DescriptionP52612
Confidence95.87%DateThu Jan 5 12:05:51 GMT 2012
Rank78Aligned Residues100
% Identity15%Templatec1zu4A_
PDB info PDB header:protein transportChain: A: PDB Molecule:ftsy; PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   166...170.........180.........190........ .200.........210.........220.........230.........240...
Predicted Secondary structure 













..


















Query SS confidence 
































. .












































Query Sequence  INALLTVGRGQRMGLFAGSGVGKSVLLGMMARY. . TRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSP
Query Conservation 

 
 


 


  
 
  
 


 

  

  ..   

 
  




  

 
          
 




  


   
Alig confidence 
































..












































Template Conservation             

   
  
 




 



      
 

 

  
  
  
  

                       
Template Sequence  YRIDFKENRLNIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFRAGATQQLEEWIKTRLNNKVDLVKANKLNAD
Template Known Secondary structure 





TTS
SSTTSSTT




S
TTTS
TT

SSTT

Template Predicted Secondary structure 



































Template SS confidence 















































































   187..190.........200.........210.........220.........230.........240.........250.........260......
 
   244.....250.........260.........270
Predicted Secondary structure 



Query SS confidence 


























Query Sequence  LLRMQGAAYATRIAEDFRDRGQHVLLI
Query Conservation    
  
   
 







 
  



Alig confidence 




.....
















Template Conservation     
 .....  
         
 


Template Sequence  PASVV. . . . . FDAIKKAKEQNYDLLLI
Template Known Secondary structure  .....TT
S
Template Predicted Secondary structure  .....



Template SS confidence 


























   267..270. ........280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions