Job Description P52612 Confidence 100.00% Date Thu Jan 5 12:05:51 GMT 2012 Rank 12 Aligned Residues 412 % Identity 25% Template c1kmhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atpase alpha subunit; PDBTitle: crystal structure of spinach chloroplast f1-atpase2 complexed with tentoxin Resolution 3.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		Y	G	R	L	T	R	A	T	G	L	V	L	E	A	T	G	L	.	Q	L	P	L	G	A	T	C	V	I	E	R	Q	N	G	S	E	T	H	E	V	E	S	E	V	V	G	F	N	G	Q	R	L	F	L	M	P	L	E	E	V	E	G	V	L	P	G	A	R	V	Y	A	K	N	I	S	A	E	G	L	Q	S
Query Conservation																			.
Alig confidence																			.														.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Sequence		T	G	T	V	L	Q	V	G	D	G	I	A	R	I	H	G	L	D	E	V	M	A	G	E	L	V	E	F	E	E	G	.	.	.	.	.	.	.	T	I	G	I	A	L	N	L	E	S	N	N	V	G	V	V	L	M	G	D	G	L	M	I	Q	E	G	S	S	V	K	A	T	G	.	.	.	.	.	.	.	R
Template Known Secondary structure										S	S								T	T			T	T						T	T		.	.	.	.	.	.	.										S	S							S	S		G	G	G			T	T								.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.								.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Q	L	P	L	G	P	A	L	L	G	R	V	L	D	G	S	G	K	P	L	D	G	L	P	S	P	D	T	T	E	T	G	A	L	I	T	P	P	F	N	P	L	Q	R	T	P	I	E	H	V	L	D	T	G	V	R	P	I	N	A	L	L	T	V	G	R	G	Q	R	M	G	L	F	A	G	S	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	Q	I	P	V	S	E	A	Y	L	G	R	V	I	N	A	L	A	K	P	I	D	G	R	G	E	I	T	A	S	E	S	R	L	I	E	S	P	A	P	G	I	M	S	R	R	S	V	Y	E	P	L	Q	T	G	L	I	A	I	D	A	M	I	P	V	G	R	G	Q	R	E	L	I	I	G	D	R	Q	T
Template Known Secondary structure				B			B	S	S	S		S	S			B		S	S	S		B	S	S	S	S						S	B			B	S	S						S	T	T	B										S		T	T	T	T	T	T	S				T	T				B					T	T	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		187	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		G	K	S	V	L	L	G	M	.	.	M	A	R	Y	T	R	A	D	V	I	V	V	G	L	I	G	E	R	G	R	E	V	K	D	F	I	E	N	I	L	G	A	E	G	R	A	R	S	V	V	I	A	A	P	A	D	V	S	P	L	L	R	M	Q	G	A	A	Y	A	T	R	I	A	E	D	F	R	D	R	G
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		G	K	T	A	V	A	T	D	T	I	L	N	Q	Q	G	Q	N	V	I	C	V	Y	V	A	I	G	Q	K	A	S	S	V	A	Q	V	V	T	N	F	Q	E	R	G	A	M	E	Y	T	I	V	V	A	E	T	A	D	S	P	A	T	L	Q	Y	L	A	P	Y	T	G	A	A	L	A	E	Y	F	M	Y	R	E
Template Known Secondary structure		S											T			T	T	T									S												T	T	T	T	T	T	G	G	G	S								S	S	S		S	T	T	T	T															T	T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		Q	H	V	L	L	I	M	D	S	L	T	R	Y	A	M	A	Q	R	E	I	A	L	A	I	G	E	P	P	A	T	K	G	Y	P	P	S	V	F	A	K	L	P	A	L	V	E	R	A	G	N	G	I	S	.	.	G	G	G	S	I	T	A	F	Y	T	V	L	T	E	G	D	D	Q	Q	D	P	I	A	D	S
Query Conservation																																																							.	.
Alig confidence																																																							.	.
Template Conservation
Template Sequence		R	H	T	L	I	I	Y	D	D	L	S	K	Q	A	Q	A	Y	R	Q	M	S	L	L	L	R	R	P	P	G	R	E	A	Y	P	G	D	V	F	Y	L	H	S	R	L	L	E	R	A	A	K	L	S	S	L	L	G	E	G	S	M	T	A	L	P	I	V	E	T	Q	A	G	D	V	S	A	Y	I	P	T	N
Template Known Secondary structure											S														T	T					G	G	G			S		S	S	T	T					T	T	S		S	B	B		T	T	T	T	S												S	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	A	I	L	D	G	H	I	V	L	S	R	R	L	A	E	A	G	H	Y	P	A	I	D	I	E	A	S	I	S	R	A	M	T	A	L	I	S	E	Q	H	Y	A	R	V	R	T	F	K	Q	L	L	S	S	F	Q	R	N	R	D	L	V	S	V	G	A	Y	A	K	G	S	D	P	M	L	D	K	A	I
Query Conservation
Alig confidence																																																																						.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		V	I	S	I	T	D	G	Q	I	F	L	S	A	D	L	F	N	A	G	I	R	P	A	I	N	V	G	I	S	V	S	R	V	G	S	A	A	Q	I	K	A	M	K	K	V	A	G	K	L	K	L	E	L	A	Q	F	A	E	L	E	A	F	A	Q	F	A	S	D	.	.	.	L	D	K	A	T	Q	N	Q	L
Template Known Secondary structure				T	T	S	S	B	B					S	S	S	S	T	T	S		S	S				T	T	T			B	T	T		G	G	G	S																						G	G	G	G	G	G		S	S	.	.	.
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.				.	.	.	.	.	.	.	410	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	W	P	Q	L	E	G	Y	L	Q	Q	G	I	F	E	R	A	D	W	E	A	S	L	Q	G	L	E	R	I	F	P	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	G	Q	R	L	R	E	L	L	K	Q	P	Q	S	A	P	L	T	V	E	E	Q	V	M	T	I	Y	T	G	T	N	G	Y
Template Known Secondary structure															T	T																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.