Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACD2
Confidence99.94%DateThu Jan 5 11:17:56 GMT 2012
Rank17Aligned Residues129
% Identity20%Templated1xata_
SCOP infoSingle-stranded left-handed beta-helix Trimeric LpxA-like enzymes Galactoside acetyltransferase-like
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110 ..
Predicted Secondary structure 






























.....................
Query SS confidence 
























































. . . . . . . . . . . . . . . . . . . . .

Query Sequence  IGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQKSYLCTGS. . . . . . . . . . . . . . . . . . . . . HD
Query Conservation 

    
     
     
 

    

    
     
 

    
   
 
    .....................  
Alig confidence 
























































.....................

Template Conservation     

 

  
 
                         
 

    
     
   
   
                   
Template Sequence  SNPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPAF
Template Known Secondary structure 

TT
TT


TTT


GGGGT

SS
SSS


SS

TT

STTTT

TTSS

S
GGG

S
GGG
Template Predicted Secondary structure 















































Template SS confidence 















































































   1920.........30.........40.........50.........60.........70.........80.........90........
 
   113......120.........130.........140.........150.........160.........170.........180..
Predicted Secondary structure 











































Query SS confidence 





































































Query Sequence  HASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANVVCRGNPAVVIRERVETE
Query Conservation              
 

    

    
  

 

   







  


  


 
 


 
  
    
Alig confidence 





































































Template Conservation            
 
 

  
 

    
  

 

 














   

 
 


 

 
    
Template Sequence  AGAVNGYQPAGDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGGNPARTIRKRFSDG
Template Known Secondary structure  GG










TT

TT

TT

TT

TT

S
B
TTTTTTSS
Template Predicted Secondary structure 














































Template SS confidence 





































































   99100.........110.........120.........130.........140.........150.........160........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions