Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACD2
Confidence99.96%DateThu Jan 5 11:17:56 GMT 2012
Rank7Aligned Residues145
% Identity16%Templated1t3da_
SCOP infoSingle-stranded left-handed beta-helix Trimeric LpxA-like enzymes Serine acetyltransferase
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40........ .50.........60.........70.........80.........90.....
Predicted Secondary structure 





.
























Query SS confidence 































.














































Query Sequence  NAIKVQLWWAVQATIFAWSPQVLYRWRAFLLR. LFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIG
Query Conservation        
                         .  
  

    
     
     
 

    

    
     
 

Alig confidence 































.





























..............


Template Conservation   
  

  

 

 
   
   

  
        





 
 

 

 



 





 
.............. 

Template Sequence  KGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIXLDHATGIVVGETA. . . . . . . . . . . . . . VIE
Template Known Secondary structure  T
S

TT

SS

S
TT

TT
..............
Template Predicted Secondary structure 
























..............
Template SS confidence 















































































   106...110.........120.........130.........140.........150.........160........ .170.
 
   96...100.........110.........120.........130.........140.........150.........160.........170.....
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  AHSVISQKSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANVVCRGNPAVVI
Query Conservation      
   
 
                  
 

    

    
  

 

   







  


  


 
 


 
Alig confidence 





















.......


















































Template Conservation 
 
 
   



        

.......
 


 
 




 


 
 

  








 



  


 
 




Template Sequence  NDVSILQSVTLGGTGKSGGDRH. . . . . . . PKIREGVXIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIV
Template Known Secondary structure  SS

TT


SSS
SS
S.......

TT

TT
SS

TT

TT

S
B
TT
TTTT
Template Predicted Secondary structure 

















.......






























Template SS confidence 















































































   172.......180.........190... ......200.........210.........220.........230.........240....
 
   176...180..
Predicted Secondary structure 






Query SS confidence 






Query Sequence  RERVETE
Query Conservation    
    
Alig confidence 






Template Conservation         
Template Sequence  GKPDSDK
Template Known Secondary structure 

SSS
Template Predicted Secondary structure 






Template SS confidence 






   245....250.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions