Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACD2
Confidence99.95%DateThu Jan 5 11:17:56 GMT 2012
Rank11Aligned Residues128
% Identity24%Templated1mr7a_
SCOP infoSingle-stranded left-handed beta-helix Trimeric LpxA-like enzymes Galactoside acetyltransferase-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90.........100.........110 .
Predicted Secondary structure 































....................
Query SS confidence 


























































. . . . . . . . . . . . . . . . . . . .
Query Sequence  AKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQKSYLCTGS. . . . . . . . . . . . . . . . . . . . H
Query Conservation    

    
     
     
 

    

    
     
 

    
   
 
    .................... 
Alig confidence 















.

















..





















....................
Template Conservation 
    

 

  
 
 .          

     
..
    

    
   
 
                         
Template Sequence  LEKLENVEVGEYSYYD. SKNGETFDKQILYHYPIL. . NDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEK
Template Known Secondary structure  TTSTT
TT
.
SSS

GGGGS

GGG..



SS

TT

GGG



SS



GGGG
TTGGG
Template Predicted Secondary structure 








.





..


























Template SS confidence 















































































   24.....30......... 40.........50....... ..60.........70.........80.........90.........100
 
   112.......120.........130.........140.........150.........160.........170.........180..
Predicted Secondary structure 











































Query SS confidence 






































































Query Sequence  DHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANVVCRGNPAVVIRERVETE
Query Conservation               
 

    

    
  

 

   







  


  


 
 


 
  
    
Alig confidence 






































































Template Conservation               
 


 
 

 

 
  

 

 














   
  
 


 

 

   
Template Sequence  HMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQD
Template Known Secondary structure  G


GGGS





SS

TT

TT

TT

TT

S
B
TTTTSS
Template Predicted Secondary structure 










































Template SS confidence 






































































   101........110.........120.........130.........140.........150.........160.........170.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions