|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | D | L | S | G | F | S | V | P | K | G | F | R | G | G | N | A | I | K | V | Q | L | W | W | A | V | Q | A | T | I | F | A | W | S | P | Q | V | L | Y | R | W | R | A | F | L | L | R | L | F | G | A | K | I | G | K | N | V | V | I | R | P | S | V | K | I | T | Y | P | W | K | L | T | L | G | D | Y | A | W | V | G |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|   | . | . |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |
|   |
Template Sequence |   |
K | X | L | S | G | K | G | Y | Y | . |
. |
A | N | D | E | L | L | V | K | E | R | E | Y | C | K | K | L | T | R | L | F | N | N | T | L | E | D | E | Y | E | K | R | E | D | I | L | R | Q | L | F | G | S | V | G | K | Q | I | N | V | E | Q | N | I | R | C | D | Y | G | Y | N | I | H | V | G | E | N | F | F | A | N |
Template Known Secondary structure |   |
 |  |  | T | T |
|
| B |
| . | . | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | S | S | B |
|
| S |
|  |  |  |
| S |
|  |  |  | S | S | S | T | T |  |  |  |
| T | T |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | |
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | V | N | L | Y | T | L | G | E | I | T | I | G | A | H | S | V | I | S | Q | K | S | Y | L | C | T | G | S | H | D | H | A | . |
. |
. |
S | Q | H | F | T | I | N | A | T | P | I | V | I | G | E | K | C | W | L | A | T | D | V | F | V | A | P | G | V | T | I | G | D | G | T | V | V | G | A | R | S | S | V | F |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |
Template Sequence |   |
Y | D | C | I | F | L | D | V | C | K | I | E | I | G | D | N | V | X | L | A | P | N | V | Q | I | Y | T | A | Y | H | P | I | D | A | Q | L | R | N | S | G | I | E | Y | G | S | P | V | K | I | G | D | N | V | W | I | G | G | G | V | I | I | T | P | G | I | T | I | G | D | N | V | V | I | G | A | G | S | V | V | T |
Template Known Secondary structure |   |
T | T |  |  |  |  |
| S | S |
|  |  |  |
| S | S |
|  |  |
| T | T |
|  |  |  |
|  |  |
|
| S | S |  |  |  |  |  | T | T |
| B |  |  |
|
|  |  |  |
| S | S |  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| S | S |  |  |  |
| T | T |
|  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
|  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | S | L | P | A | N | V | V | C | R | G | N | P | A | V | V | I | R | E | R | V | E |
Query Conservation |   |
  |
|
|
|   |   |
|
|
|   |
|   |
|
|
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |
|   |   |
|   |
|
|
|   |
|
|   |   |   |   |
Template Sequence |   |
K | D | I | P | P | N | T | V | A | V | G | N | P | C | R | V | I | K | K | I | E | E |
Template Known Secondary structure |   |
S |
| B |
| S | S |  |  |  |  | T | T | T | T |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |